Psychroserpens sp. NJDZ02: E9099_09085
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Entry
E9099_09085 CDS
T05945
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
psyn
Psychroserpens sp. NJDZ02
Pathway
psyn03030
DNA replication
psyn03410
Base excision repair
psyn03420
Nucleotide excision repair
psyn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psyn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
E9099_09085 (polA)
03410 Base excision repair
E9099_09085 (polA)
03420 Nucleotide excision repair
E9099_09085 (polA)
03440 Homologous recombination
E9099_09085 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psyn03032
]
E9099_09085 (polA)
03400 DNA repair and recombination proteins [BR:
psyn03400
]
E9099_09085 (polA)
Enzymes [BR:
psyn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
E9099_09085 (polA)
DNA replication proteins [BR:
psyn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
E9099_09085 (polA)
DNA repair and recombination proteins [BR:
psyn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
E9099_09085 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
E9099_09085 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_2
HHH_5
HHH
Motif
Other DBs
NCBI-ProteinID:
QCE41567
LinkDB
All DBs
Position
complement(2098184..2101039)
Genome browser
AA seq
951 aa
AA seq
DB search
MSDNKRVFLVDAFALIFRGYYAFIKNPRINSKGVDTSAVMGFMNSLLDVIKRERPDHLAV
CFDKGGSADRVELFEAYKANRDETPEAIKIAVPIIQEILKAMHIPIMVKAGFEADDVIGT
LAKQAEKEGFQTFMVTPDKDFAQLVSENIFMYRPMFGGGYETWGIPEVQKKFEVTDPLQV
IDFLGMMGDASDNIPGLPGVGEKTAKKFLAAYGSMENLLDNTHELKGKMKEKIEANKELG
LLSKKLATIMLDVPVTFNAKDFELDTPDIPKVTEIFQELEFRRLIDNFTKTFTSGAEATA
HSNDKASVKKEVKVTPKEAESAGAGQFNLFGGDPSSATATLEDNTFARKTAATNSHFYQS
VAPGMATTLFIKNLMSQTSVCFDTETTGLNPLIAELVGISFSWEIGKGFYLPFPEDKSEA
QDIIEALRPFFEDETIQKIGQNLKYDIKVLAKYNLQVKGPLFDTMLAHYLINPDMRHNMD
ILAETYLNYTPISIVELIGKKGKNQLSMRDVPLDKQTEYAVEDADITLQLKEHFEKELGE
ANTKKLFTDIEVPLVRVLAAMELEGINLDVPFLNTLAQDLNKDIDTLVAKIYEVAGEEFN
IASPKQLGIILFEKLKLVDKPKKTKTGQYKTGEDILSALAKEHEIIRDILEYRGLAKLKS
TYVDALPLQVEPSTGRVHTDYMQTVAATGRLSSNNPNLQNIPIRTERGRQVRKAFIPRND
EYTLLAADYSQIELRIIAALSEEETMIEAFKNGEDIHASTAAKVFGVPLEEVTREQRSNA
KTVNFGIVYGVSAFGLSNQTDLSRGEAKELIDTYYETYPKLKKYMSAQVEFARDNGYVKT
VLDRRRYLKDINSANAIVRGAAERNAVNAPIQGSAADIIKIAMINIYNKLEAGNYKTKML
LQVHDELVFDVYKPELEEMKTLIKTEMEGAFVMEVPLDVEMDIGLNWLEAH
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atgtcagataacaaacgtgtatttctagtagatgcttttgccttaatttttcgtggctac
tatgcctttataaaaaacccaagaatcaactctaaaggcgtcgatacgtctgcggttatg
ggatttatgaattcacttttagacgtcattaaacgcgaaagaccagatcatttagccgtt
tgttttgataaaggaggaagtgcggaccgtgtagaactattcgaagcctacaaagccaat
cgtgacgaaacaccggaagccattaaaattgcagtcccaattatacaggagattttaaaa
gccatgcacatcccaattatggtaaaagcaggttttgaagccgatgatgttattggtact
ttggcaaaacaagccgaaaaagaaggtttccaaacctttatggtaacgccagataaggat
tttgcgcaattagtaagcgaaaacatttttatgtaccgcccaatgtttggtggaggctat
gaaacttggggaatcccagaagtacagaaaaagtttgaagttacggatccgttacaagtt
attgactttttagggatgatgggagatgccagtgataacattccgggtttaccaggtgtt
ggagaaaaaacagccaagaagtttttggcagcctacggaagtatggaaaatcttttagac
aacacacacgagctaaaaggcaaaatgaaagagaagattgaagccaataaagagttaggt
ttattatctaaaaaactagcaacaattatgctagatgttccggtgacttttaacgccaag
gattttgagttagacacgccggacattcctaaagtgactgagatttttcaggagttagaa
tttagaagactaatagataattttacaaaaacatttacatctggtgccgaggctacagca
catagcaacgacaaggcttcagttaaaaaagaagtaaaagtaacaccaaaagaagcagaa
agtgccggagcaggtcaattcaatttgtttggaggcgacccaagttccgcgacagcgaca
ttagaagacaatacatttgcacgcaaaacagccgcaaccaacagtcacttttaccaaagc
gttgcgcctgggatggcaaccacattatttattaaaaatttaatgagccaaacatccgtg
tgttttgataccgaaaccacaggtttaaacccgttaattgcagagttggttgggatttca
ttttcatgggaaattggtaaaggcttttacctaccgtttccggaggacaaaagcgaagca
caggacataatcgaagccttacgaccattttttgaagatgaaactattcagaaaattggc
cagaatttaaaatacgacattaaagtattagccaaatataatctgcaagtaaaaggccca
ttattcgacaccatgttagcgcattatttaattaatccagacatgcgtcacaatatggat
atattggcagaaacgtacttaaactacacgccaatttctattgtggagttaattggtaaa
aaaggaaaaaatcaattatccatgcgcgatgttccgttagacaaacaaacggaatatgca
gtagaagatgccgatattacattacaacttaaagagcattttgaaaaagaattaggcgaa
gccaataccaaaaaattattcacagatattgaagtgcctttagtacgcgttttagcagca
atggaactggaaggtattaatttagatgtgccttttttaaacacgttagcgcaagattta
aacaaagacatcgacactttagtcgctaaaatttacgaggttgctggcgaagaatttaat
atcgcctctccaaaacaattaggaattattctttttgaaaaactaaaactagtagacaaa
cctaaaaagaccaaaacgggtcaatataaaacaggagaagatatcttatctgctttagca
aaagagcacgaaattattagagatatcttagaataccgtgggttagcaaaactaaaaagc
acgtacgtggacgccttaccgttacaagtcgaaccttctacaggtcgtgtacacacagat
tatatgcaaaccgttgcggctacaggacgtttaagtagtaacaatcctaacttacaaaac
ataccaatccgtacagaacgtggacgacaagtgcgtaaagcctttataccacgtaatgac
gaatatactttattagctgccgattatagccaaatagaactgcgtattattgcggcttta
agcgaagaggaaaccatgattgaagcctttaaaaacggagaagatattcacgcttctacc
gctgcaaaagtatttggtgtgcctttagaagaggtcacccgtgagcaacgtagtaatgcc
aaaaccgtaaacttcgggattgtatatggtgtttctgcttttggattaagcaaccagact
gatttatcgcgtggcgaagccaaagagcttattgacacctattacgaaacctacccaaag
cttaaaaaatacatgagcgctcaagtcgagtttgcgcgtgataatgggtatgtaaaaacc
gttttagatcgtagacgttaccttaaagatattaatagtgccaatgctattgtgcgtggc
gctgcagagcgtaacgcggttaatgcaccaatacaaggtagtgctgcagatattattaaa
attgccatgattaatatttataataaactagaagctggtaattataaaactaaaatgcta
ctgcaagtgcatgatgaattggtttttgatgtttacaaacctgaacttgaggaaatgaaa
acattaattaaaaccgaaatggaaggtgcttttgtaatggaagttcctttggatgtggaa
atggatattggattgaattggctggaggcgcattag
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