Psychroserpens sp. NJDZ02: E9099_11260
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Entry
E9099_11260 CDS
T05945
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
psyn
Psychroserpens sp. NJDZ02
Brite
KEGG Orthology (KO) [BR:
psyn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psyn03032
]
E9099_11260 (gyrB)
03400 DNA repair and recombination proteins [BR:
psyn03400
]
E9099_11260 (gyrB)
Enzymes [BR:
psyn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
E9099_11260 (gyrB)
DNA replication proteins [BR:
psyn03032
]
Prokaryotic type
DNA Topoisomerases
E9099_11260 (gyrB)
DNA repair and recombination proteins [BR:
psyn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
E9099_11260 (gyrB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QCE41967
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All DBs
Position
2571702..2573651
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AA seq
649 aa
AA seq
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MSEKKEEFNKDGYSADSIQALEGMEHVRMRPSMYIGDVGVRGLHHLVYEVVDNSIDEALA
GHCDNITVTINEDNSITTEDDGRGIPVGLHKKEGVSALEVVMTKIGAGGKFDKDSYKVSG
GLHGVGVSCVNALSDHLHAIVYRDGKVYEQEYAKGKPLYPVKSTGDTDKRGTTVTFRPDP
TIFTQTLEYNYDTLASRMRELAYLNKGITVHLVDKRFTKEDGSFEGETFHSEEGLKEFIK
FLDATREPLMKDVISFEGEKNGVPVEVAMIYNTSYAENLHSYVNNINTHEGGTHLSGFRR
GLTHTLKKYADESGMLDKLKFDIAGDDFREGLTAIISVKVQEPQFEGQTKTKLGNREVSA
AVSQSVSEMLSDYLEENPDDAKIIVQKVILAAQARHAAQKAREMVQRKTVMSIGGLPGKL
SDCSEQDPAKCEVYLVEGDSAGGTAKQGRDRAFQAILPLRGKILNVEKAMTHKVFENEEI
KNIFTALGVTIGTEEDSKALNLSKLRYHKIVIMCDADIDGSHIETLILTFFFRYMKELIE
NGHIYIATPPLYLVKKGAKKQYAWSDEERVAIMKEFGESSKIQRYKGLGEMNAEQLWDTT
MNPEFRTLRQIQIDNGVEADRVFSMLMGDEVPPRREFIEKNAIYANIDA
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaaaaaaggaagagttcaataaagatggctattcagcagatagtatccaggct
ttagaaggtatggagcatgtgcgtatgcgtccttccatgtatattggggatgtcggagta
cgtggtttacaccatttagtatatgaagttgtagataactcgattgatgaagctttagct
ggtcattgtgataatattacagttacaattaatgaggataactcgattactacagaagat
gatggtcgtggtattcctgtagggttacacaaaaaggaaggggtttctgcattagaagtt
gtaatgactaaaattggtgctggtggaaagtttgataaagattcttataaagtttctggt
ggacttcacggtgtaggtgtaagttgtgtaaatgcattatcagatcaccttcatgcaatt
gtttacagagatggtaaggtttacgagcaggaatatgctaaaggaaaaccgttatatcct
gtaaagtcaacaggagatacagataaaagaggaacaacagttacttttagaccagatcca
acaatttttacacaaacgttagagtataattatgatactttagcaagtagaatgcgcgaa
ttagcgtatttaaataaaggtattacagttcatttagttgataagcgttttacaaaagaa
gatggttcttttgaaggtgaaacatttcattctgaagaaggattaaaagaatttatcaag
tttttagatgcgacaagagagcctttaatgaaagatgttatttcttttgaaggtgaaaaa
aatggtgtacctgttgaggttgcaatgatttataatacatcatatgcagagaacttacat
tcttatgtaaacaacattaacacacacgaaggagggacgcacctttctggttttagacga
ggtttaacacatacacttaaaaagtatgcggatgagtcagggatgttagacaaattaaag
tttgatattgcaggagatgatttccgtgaaggtttaacagctattatttcggtaaaagtt
caagagcctcaatttgagggacaaacaaaaactaaattgggaaacagagaagtttctgca
gcagtaagtcaatctgtttcagagatgttatctgattatttagaggaaaatccagacgat
gctaaaatcatagtgcaaaaggtaatccttgcagcacaagcccgtcacgccgcacaaaaa
gcgcgtgaaatggtacagcgtaaaacagtaatgagtattggtggtttgccagggaaatta
tctgattgctctgagcaagatcctgcaaaatgtgaagtgtacttagtcgagggagattcg
gcaggtggtactgcaaagcaaggtcgtgatagagcgttccaagcgattttgcctttacgt
ggtaagattttaaatgttgaaaaagcgatgacacataaagtgtttgaaaacgaagagata
aaaaatatctttacagctttaggtgtcactatcggaacagaagaagatagtaaagcctta
aacctttctaaattaagataccacaaaatagtaatcatgtgtgatgccgatatcgatggt
tcgcatattgaaactttaattttgactttcttttttagatatatgaaagagttaattgaa
aacggacatatctatattgcgacaccgcctttatacttagttaaaaaaggagctaaaaaa
caatatgcttggagtgatgaagagcgtgttgctattatgaaagagtttggtgagtcttca
aaaatacaacgttataagggtcttggagagatgaatgcagaacaactttgggatacaaca
atgaatcctgagtttagaacattacgtcaaatacagattgataatggtgtagaagcagat
cgcgtattttctatgttaatgggagatgaggttccacctcgtagagagtttattgagaaa
aacgctatttatgcaaatattgatgcttaa
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