Psychroserpens sp. NJDZ02: E9099_12925
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Entry
E9099_12925 CDS
T05945
Name
(GenBank) HAD-IIIA family hydrolase
KO
K03270
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:
3.1.3.45
]
Organism
psyn
Psychroserpens sp. NJDZ02
Pathway
psyn00541
Biosynthesis of various nucleotide sugars
psyn01100
Metabolic pathways
psyn01250
Biosynthesis of nucleotide sugars
Module
psyn_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
psyn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
E9099_12925
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
psyn01005
]
E9099_12925
Enzymes [BR:
psyn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.45 3-deoxy-manno-octulosonate-8-phosphatase
E9099_12925
Lipopolysaccharide biosynthesis proteins [BR:
psyn01005
]
Lipid A
E9099_12925
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Gene cluster
GFIT
Motif
Pfam:
Hydrolase_3
Hydrolase
HAD_2
Hydrolase_6
HAD
DUF4847
Spore-coat_CotZ
Motif
Other DBs
NCBI-ProteinID:
QCE42267
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Position
complement(2927968..2928498)
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AA seq
176 aa
AA seq
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MDNKSYKEYLHQITTFIFDVDGVLTNGMITITTSGEMIRHMNVKDGYAMKQALNHGYNVC
IISGGTNEGVRTRLNHLGIKDVYLGAHQKIEQLEEYLNNNQIKAEHVLYMGDDIPDVPVL
KLVGMPSCPQDAVPEVKRVSKYISHKLGGEGCVRDVIEQVMKVQNKWDSDFDAQTF
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
atggacaataaaagctataaagaatacctacaccaaattacaacctttatttttgatgta
gacggtgtactgaccaatggaatgattacaatcacgacttcaggtgagatgattagacac
atgaatgttaaggatggttacgcaatgaaacaagccttaaatcatggatataatgtgtgt
attatttctggaggaactaacgaaggggtgcgtactagattaaaccatttagggattaaa
gatgtgtatttaggtgcgcatcaaaaaattgaacagcttgaagaatatttaaataataat
caaattaaagcagagcacgtattatatatgggagacgatattcctgatgttcctgtttta
aaattggttggtatgccaagttgccctcaagatgctgttcctgaagtaaaacgtgtctct
aaatacatctcgcataaattaggtggtgaaggttgtgtccgtgacgtcatcgaacaagtt
atgaaagtgcaaaataaatgggatagtgattttgatgcccagacgttttaa
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