Psychroserpens sp. NJDZ02: E9099_14905
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Entry
E9099_14905 CDS
T05945
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
psyn
Psychroserpens sp. NJDZ02
Pathway
psyn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psyn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E9099_14905 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psyn03019
]
E9099_14905 (rny)
Messenger RNA biogenesis [BR:
psyn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
E9099_14905 (rny)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH-I_KHDC4-BBP
KH_2
Motif
Other DBs
NCBI-ProteinID:
QCE42639
UniProt:
A0A4P7WYJ7
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All DBs
Position
3370156..3371727
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AA seq
523 aa
AA seq
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MDKTILIIAGIAIGAIIGFIVAKILERNNASKLIKGAKKSASAILKEANVEGEGIKKDKI
LQAKEKFLELKAEHEKVILSRDKKMSDTEKRVRDKESQVSSELSKNKKLNTDIEVKVKDY
NHRLDVLDKKQEELDRLHKSQVEQLEVISSLSADEAKSQLVESLKGEAKSDAMAYIQDKM
EEAKLTAQQDAKKIIINTIQRIGTEEAVDNCVSVFNIESDDVKGRIIGREGRNIRAIEAA
TGVEIIVDDTPEAIILSCFDSVRREVARLSLHKLVTDGRIHPARIEEVVKKTQKQIEQEI
IEVGKRTVIDLGIHGLHPELIKMVGRMKYRSSYGQNLLQHSREVAKLCGVMAAELGLNPK
LAKRAGLLHDIGKVPDAEADMETPHAILGMQWAEKYGEKDEVCNAIGAHHDEIEMKSLLS
PIIQVCDAISGARPGARRQVLDSYIQRLKDLEEIAFGFNGVKKAYAIQAGRELRVIVESE
KVSDQIAADLSFSISQKIQTDMTYPGQVKVTVIRETRAVNIAK
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggataaaacaattttaattatagcaggtattgcaataggagccataataggttttata
gtcgctaaaatattagagcgcaacaatgcatcaaaacttatcaaaggtgcaaaaaaatca
gcttcagctatcctcaaggaagctaatgtagagggagaaggtattaaaaaagataaaata
cttcaagcaaaagagaagtttttagagcttaaagcagaacatgaaaaagtgatcttatca
cgtgacaaaaaaatgtctgacacagaaaaacgtgttagagataaagagtctcaagtatct
agtgaactatctaagaataaaaagttaaataccgatatagaagttaaggtaaaagattat
aatcatagacttgatgttttagataaaaaacaagaagagttagaccgattacataaaagt
caggtagagcaattagaagttatttctagcttatctgcagacgaggctaaatctcaatta
gtagagtctttaaaaggtgaagcaaaaagtgatgctatggcgtatatccaagataaaatg
gaagaagctaaattaacagcacaacaagacgctaaaaaaattataattaatacaatacaa
cgtattggtacggaggaagcagtagataattgtgtttctgtatttaatattgaaagtgat
gatgttaaaggacgtattattggtcgtgaaggacgtaatattcgtgcaattgaagctgcc
acaggcgtagagattattgtagatgatacgccagaggcaattatattatcatgctttgac
tcggttagaagagaggtagcacgtttatcacttcataaattagtaacggatggacgtatt
cacccagcacgaattgaagaagtcgtaaagaagacacaaaaacagatagaacaagaaatt
attgaagttggtaaacgcacggtaatcgatttaggtattcatggtttacatccagaattg
ataaaaatggttggacgtatgaagtatcgttcgtcttacggacaaaacttattacaacac
tcgcgtgaagttgctaaactttgtggtgtaatggctgccgaattaggtttaaatccaaaa
ttagctaagcgtgcgggattattacatgatataggtaaagtaccagatgcagaagcagac
atggaaacaccacatgctattctaggtatgcaatgggctgagaagtatggagagaaggat
gaagtatgtaatgccattggagctcaccacgacgaaatcgagatgaaatctttattatca
ccaatcatacaggtttgtgatgctatttctggagcgcgtccaggggcaagacgtcaagta
ttagatagttatatacaacgtttgaaggatttagaagaaattgcttttggatttaacgga
gttaaaaaagcatacgcaatacaagcaggtagagaattacgtgttattgtggaaagtgaa
aaagtaagcgaccaaattgcagcagatttatcgtttagtatttctcaaaagatacaaaca
gatatgacatatccaggtcaggtaaaagttacagtaattagagaaaccagagctgttaat
atagcaaagtag
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