Psychroserpens sp. NJDZ02: E9099_16885
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Entry
E9099_16885 CDS
T05945
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
psyn
Psychroserpens sp. NJDZ02
Pathway
psyn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
psyn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
E9099_16885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psyn03400
]
E9099_16885
Enzymes [BR:
psyn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
E9099_16885
DNA repair and recombination proteins [BR:
psyn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
E9099_16885
Prokaryotic type
E9099_16885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
PTHB1_CtH
Motif
Other DBs
NCBI-ProteinID:
QCE43020
UniProt:
A0A4V1D6U7
LinkDB
All DBs
Position
complement(3828763..3829428)
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AA seq
221 aa
AA seq
DB search
MNVNIHHSWKTPLQTEFDKPYFKDLTQFVTEDYKQNQCFPTENLIFNAFDTCHLDDLKVV
IIGQDPYHNYNQANGLCFSVNEGVKHPPSLINIFKEIETDLGKPYPSSGNLERWAQQGVF
LLNATLTVRAHEAGSHQKQGWESFTDAVIKMISDQKENVVFLLWGGFAKKKGKLIDADKH
HILTSGHPSPLSANRGYWFGNRHFSQTNNLLASDGLDVIDW
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtcaatatacatcacagttggaaaacaccattacaaaccgaatttgataaaccc
tattttaaggatttaactcaatttgttactgaagattataaacaaaatcaatgttttccg
acagaaaatttgatttttaatgcttttgacacctgccatttagacgacttaaaagttgtt
attattggtcaagatccatatcataattacaaccaagccaatgggttgtgttttagtgta
aatgagggggtaaaacatccgccatcattgattaatatttttaaagagattgaaaccgat
ttagggaaaccatatccgtcaagcggaaatttagagcgttgggcccaacaaggcgtcttt
ttgctaaatgcgacattaaccgttagggcacacgaggctggaagtcatcaaaaacaaggt
tgggaaagctttacagacgctgttattaaaatgattagtgaccaaaaagaaaacgtagtg
tttttactctggggaggatttgctaagaaaaaagggaagttaattgacgccgataaacat
catattttgacctctggacatccctcgcctttaagtgctaatcgtggctattggtttggg
aacagacattttagtcaaactaataatttgttagcgtctgacggtttggatgtgatagat
tggtaa
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