Psychroserpens sp. NJDZ02: E9099_18420
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Entry
E9099_18420 CDS
T05945
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
psyn
Psychroserpens sp. NJDZ02
Pathway
psyn03030
DNA replication
psyn03430
Mismatch repair
psyn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psyn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
E9099_18420
03430 Mismatch repair
E9099_18420
03440 Homologous recombination
E9099_18420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psyn03032
]
E9099_18420
03400 DNA repair and recombination proteins [BR:
psyn03400
]
E9099_18420
Enzymes [BR:
psyn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
E9099_18420
DNA replication proteins [BR:
psyn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
E9099_18420
DNA repair and recombination proteins [BR:
psyn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
E9099_18420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
TPPII_C
Motif
Other DBs
NCBI-ProteinID:
QCE43310
UniProt:
A0A4V1D6X6
LinkDB
All DBs
Position
complement(4174258..4177215)
Genome browser
AA seq
985 aa
AA seq
DB search
MYLNCHSYYSLRFGTFSETDLLDLAKANAIRALALTDINNTSACLNFVRHAKKRNIKPVI
GIDFRTGARQHFVGLAKNNEGFKALNSFLSQHSEQKLQLPEVAPTFNNAFIIYPFENVLQ
LNKKNFADHEFIGVSITDLRKLRFSSLKQLQHKIVLLQPVTVRDKKDFNAHRLLRAIDNN
TLLSKLEKTEECNPEDKMWSLEQLNIAVAEFPFVLKNTKALLDQCEIEFGFDDQRESQNQ
KRYTDSFENDCLLLEQLCDQGLPKRYANPTPKVYARLKTELDTIKSMHFVSFFLINHDIV
SYAKSQGYFHVGRGSGANSIVAYIIGITDVDPIELDLYFERFINPFRASPPDFDIDFSWK
DRDDVTAYIFRRFKHTALLATYNTFKYRAVVRELGKVFGLPKEEIDKLSKNSYNASSLDD
ISKLVLKYGKLIEGFPNHLSVHSAGILILEQPVHCYSATDLPPKGYPTVQFDMNIAEDVG
VFKFDILGQRGLAKIKEALEIIAENRPELPPIDITNVEAFKKDPNINNLLKSGGAIGAYY
VESPAMRGLMQQLQTQDYLGLVAASSIIRPGVSGSGMKDEFIKRHRTPEKRKEAHPILYN
IMPETYGVMVYQEDVLKVANQFADLTLGEADVLRRGMSGKYRSLKEFEAVEEKFIANCRK
KGYADALIFEVWNQIKSFAGYAFAKGHSASYAVESYQSLYLKCYFPLEFMTAVLNNGGGF
YSAEHYFHEARQQGATICLPCVNTSDHPNRLIDTSIYLGLGYLKSLEAYTIKRLLTERQL
HGPFTSLDDFIDRILISIEQLTILIRSNAFRFTNIPKVELLWKAIFKLNAKGKDTIQSKL
FKTEHKQFTLPKLDNNWIENAYDEMELIGFPLCNYFDLVSEPMEGDVLASQMHLFVNKTI
LIYGNLVTTRFNKTTQGKLMRLSTFVDKNGDYFDAVHFTNVVHQFPVNGLGVYACYGKIT
DRFGFYSMSVVWSRKLSVVQDPRNN
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
atgtatttaaactgtcactcatattactctttgcgttttggaacattttctgaaaccgat
cttttagatttagcaaaagctaatgctataagggctctggcgttgacagatattaataat
acctcggcgtgtttaaattttgtgcgtcatgctaaaaaacgtaatattaagcctgtaatt
ggtattgattttaggacgggcgcacgacaacattttgttggtttagcaaaaaataatgag
ggttttaaagcgttaaatagctttttgtcgcaacattctgaacaaaaattacaattacca
gaggtggcaccaacatttaataatgcatttataatttatccttttgaaaacgtcttacaa
ctaaacaaaaaaaactttgctgaccacgagtttattggggtgtctattaccgatttgcgc
aaacttagattttcgtccttaaaacaattgcaacacaaaattgttttattgcagcctgtg
acggtaagagataaaaaggattttaatgcccaccggttattaagagccatagataataac
acgctattaagtaagcttgaaaaaacggaggaatgtaatcctgaagataaaatgtggtct
ttagagcaattaaatatagctgtagctgaatttccttttgtcctaaagaatacaaaagcg
ttgctagaccaatgtgagattgagtttggttttgacgatcaacgagagtctcaaaatcag
aaacgatacacagattcgtttgaaaatgattgtttgttattagaacaattgtgtgatcaa
ggcttgccaaaacgctatgctaatccaacaccaaaagtttatgcccgtttaaaaaccgaa
ttggataccatcaaatctatgcattttgtgtccttttttcttatcaatcacgatatcgtg
tcttacgctaaaagccaagggtattttcatgttgggcgtggtagtggtgccaatagtatt
gtggcatatattatcgggattacagatgtagatcctatcgagttagatttatattttgaa
cgctttatcaatccttttagagcatctccaccagattttgatatcgatttttcttggaaa
gatcgggatgatgttaccgcctatattttcagaagatttaagcataccgcattattagca
acctataatacgtttaaatatcgtgcggtagttagagagttggggaaggttttcggttta
ccgaaagaagagattgacaaactaagtaaaaacagctacaacgcttctagtttagacgat
atttcgaaattggttttaaaatatgggaagttaattgaaggctttccaaaccatttaagc
gtgcattccgccggaatcttaattttagagcaacccgtacattgttattcggcaacagat
ttacctccaaaagggtatccaaccgtgcagtttgatatgaatattgccgaagatgttggc
gtctttaaatttgatattttagggcaacgtggtttagcaaaaattaaagaagcgctagaa
attattgccgaaaacagacccgaattaccaccaatagatattacaaatgtcgaagctttt
aaaaaagatccaaacattaataatctattaaaatcaggaggtgcaattggggcgtattat
gtagagtctcctgcaatgcgtgggttaatgcagcaattacaaacacaagattatttaggt
ttggtggcagcaagttctataatcagacctggtgtatcgggttctgggatgaaagacgag
tttattaaacgccatcggacgccagaaaagcgtaaagaggcacatcccatattgtataac
attatgccagaaacttatggtgtgatggtttatcaagaggatgtgttgaaggtggctaat
cagtttgccgatttaactttaggcgaagcagatgtgcttagacgtggtatgagcggtaag
tatagatctttaaaagagtttgaagctgtcgaagaaaaatttattgctaattgcagaaaa
aaaggatatgctgacgctttaatttttgaagtctggaaccaaattaaaagttttgcgggt
tacgctttcgcgaaaggacattcggcatcgtacgctgtagaaagttatcagagtttgtat
ttaaaatgttatttcccgttagagtttatgaccgctgtacttaataatggtggtggtttt
tatagtgcagaacattattttcatgaagctagacagcaaggcgccaccatttgtttgcct
tgtgtaaatactagtgatcatcccaataggttgattgatacgtctatttatttagggttg
gggtatttaaaaagtttagaggcttataccatcaaacgcctattgacggagcgtcagtta
cacggaccgtttacctctttggacgattttattgataggattttgattagtatcgaacaa
ctcaccattttaattagaagtaatgcctttagatttaccaatatccctaaagtagaattg
ctttggaaagctatttttaaattgaatgccaaaggaaaagacaccatacaatccaaactg
tttaaaacggagcataaacaattcactttaccaaaattagataataattggattgaaaat
gcttatgacgaaatggaattgattggttttccgttatgcaattattttgatttagtaagt
gaacctatggaaggtgatgtgttggcctcccaaatgcatctgtttgttaataaaacaata
cttatttacggtaatttagtgaccacgcgttttaataaaacaacacaaggtaaattgatg
cgcttaagtacgtttgtagataaaaacggagactattttgatgcggtacattttacaaat
gtggtccatcaatttcctgttaatgggttaggggtttatgcttgttatggaaaaataaca
gatagattcggtttttatagtatgagtgtggtttggagtaggaaactttcagtagtacaa
gatcctagaaataattag
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