Psychrobacillus glaciei: PB01_00995
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Entry
PB01_00995 CDS
T06231
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
psyo
Psychrobacillus glaciei
Pathway
psyo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psyo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PB01_00995 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psyo03019
]
PB01_00995 (recQ)
03400 DNA repair and recombination proteins [BR:
psyo03400
]
PB01_00995 (recQ)
Enzymes [BR:
psyo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PB01_00995 (recQ)
Messenger RNA biogenesis [BR:
psyo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PB01_00995 (recQ)
DNA repair and recombination proteins [BR:
psyo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PB01_00995 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
Helicase_C
DEAD
HRDC
RecQ_Zn_bind
ResIII
HHH
Motif
Other DBs
NCBI-ProteinID:
QFF97501
UniProt:
A0A5J6SI67
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All DBs
Position
196733..198499
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AA seq
588 aa
AA seq
DB search
MLEKARQLLQTYFGYDSFREGQETVINYVLENKASLCVMPTGGGKSLCYQIPSLMLEGTT
IVISPLISLMKDQVDTLLQAGIPATFINSTLTAEEVRETMEEVQNGQYRLLYIAPERLES
TNFLNQLKRVKVPLIAVDEAHCISQWGHDFRPSYRAIHRLKEVFEEAPVVLALTATATPD
VRADICRLLQIKEDNTVITGFARSNLSFSVVLGQDKNRFLKDFIKKNAQEVGIIYAATRK
TVDLLYELLIKSGVRTAKYHAGLPEAFRNKEQERFLTDEAQVMVATNAFGMGIDKSNVRY
VIHYQLPKNMESYYQEAGRAGRDGLPSECVVLYASQDVQTQRFLIDQALDRERIPQELEK
LQGMVDYCHTENCLQQFIVYYFGEPNGEPCGRCGNCTDKREMSDVTKEVQMVLSCVVRMG
QKFGKTITAQVLTGSQNKKVVDFGFIKLSTYGILKNKSLKEVSGLMEFMISEGLLSVNHG
SLPTIYVSDAGKDVLLGKRQVMRKGVAVTKQIAKNDPLFEGLRVLRKKLADEAGVPPFVI
FSDKTLQDMCVKRPQTEEELLDVHGVGANKQEKYGKVFLEEINRYSTV
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
gtgttagaaaaagcacgtcaattattacaaacttattttggatatgattcgtttcgagaa
ggacaggaaaccgttataaactatgtgttagaaaataaagcgagtttatgtgtaatgcca
acaggaggagggaaatctctttgctatcaaattccttctttaatgttggaaggaacaaca
atcgttatttcgcccttgatttctctaatgaaagatcaagtagacacattattacaggca
gggattccagctacctttatcaatagtacattaactgctgaagaagtaagagaaacgatg
gaagaagtgcaaaatgggcaatatcgtctcctttatattgcacctgaacgactggaatct
acaaacttcttaaatcaactaaagcgtgttaaagtgccattaatagcagtagatgaagcg
cattgtatttcccaatggggacatgatttccgaccaagctatcgtgcaattcatcgatta
aaggaagtttttgaagaagcacctgttgtacttgctttaactgccaccgctactccagat
gttcgtgccgatatatgtagattgcttcaaattaaagaggataatacagtaattacagga
tttgctcgttcaaatttatctttttcggttgtactaggacaagataaaaatcggttttta
aaggactttattaaaaagaacgctcaagaagtcggtattatttatgctgctactagaaaa
acggtcgatttactatatgagttgttaataaaatcaggagtccgaactgcaaaatatcat
gcaggacttccggaagcatttcgaaataaagagcaggagcggtttttaacagatgaagca
caagtaatggttgcgacgaatgcattcggcatgggaatcgataaatcgaatgtacgatat
gtcattcattatcagcttcctaaaaacatggagagttattatcaagaggcaggaagagct
ggacgagacggtttgccgagtgagtgcgtcgttttatatgcttcacaagacgtgcaaacg
caacgatttttaatagatcaagcgttggatcgtgaaagaattccgcaagaattggaaaag
ctacaaggaatggtcgattattgtcatacggaaaattgtttacaacagtttatcgtgtat
tattttggagagccaaacggagagccatgtggtcgttgtggaaattgcacggataaaagg
gaaatgtcagatgttacaaaagaagtccaaatggtcttgtcttgtgttgttcgaatgggt
caaaaatttgggaaaacaattacggcgcaagtgttaaccggttcacaaaacaaaaaagta
gtggattttggatttataaaactatctacgtacgggatattaaaaaataagtcgttaaaa
gaagtttctggtctaatggagtttatgatttcagaaggtttactttcagttaatcatggc
agcttacctaccatttatgtatcggatgcaggaaaggatgtattacttgggaaaagacaa
gtgatgcgtaaaggagtagcagtaacgaaacaaatcgcgaagaatgatccgttatttgaa
ggtttaagagtgcttcggaaaaaacttgcggacgaagctggtgtaccaccgtttgttatt
ttttcagataaaacactacaagacatgtgtgtaaagcgcccgcaaaccgaagaagaatta
ttagatgttcatggagtaggtgcaaataagcaagaaaaatacggaaaagtttttctcgaa
gaaattaatcgttatagtacagtgtaa
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