Psychrobacillus glaciei: PB01_03320
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Entry
PB01_03320 CDS
T06231
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
psyo
Psychrobacillus glaciei
Pathway
psyo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psyo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PB01_03320 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psyo03021
]
PB01_03320 (rho)
03019 Messenger RNA biogenesis [BR:
psyo03019
]
PB01_03320 (rho)
Transcription machinery [BR:
psyo03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
PB01_03320 (rho)
Messenger RNA biogenesis [BR:
psyo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
PB01_03320 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
S1CSD-TOTE-2
AAA
ATPase_2
AAA_22
NACHT
AAA_25
Spore_III_AA
Motif
Other DBs
NCBI-ProteinID:
QFG01083
UniProt:
A0A5J6SUB0
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All DBs
Position
699818..701101
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AA seq
427 aa
AA seq
DB search
MTQTTINELENMTLKELYALARKYKVATYSKLSKKELIFAILKSRAEQEGFFFMEGVLEI
IQQEGFGFLRPINYSPSSEDIYISASQIRRFDLRNGDKVTGKVRPPKESERYYGLLHVEL
VNGEDPEIAKERVHFPGLTALYPDRHIKLETEPDKLSTRIMDLVAPVGYGQRGLIVAPPK
AGKTLLIKEIANAITTNHPNAELIVLLIDERPEEVTDIERSVKADVVSSTFDEVPENHVK
VAELVLERAMRLVEHKRDVIILMDSITRLARAYNLVIPPSGRTLSGGIDPAAFHRPKRFF
GAARNIEEGGSLTILATALVDTGSRMDEVIYEEFKGTGNLELHLDRSLAERRIFPAIDIR
RSGTRKEELLIPKDQLDKLWAIRKTFSDSGDFGERFLKKLRQSKTNEAFFEQLAVEMKAH
RSGKVTL
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgacacaaacaactattaatgagctagaaaatatgactttaaaagagctttatgccctt
gcacgaaagtataaggttgcaacttatagcaaactttcaaaaaaggaacttatttttgct
atattaaaatctcgtgcagaacaagaaggatttttcttcatggaaggcgtattagaaatt
atccaacaagaaggttttggtttcttacgccctattaactattctccaagttctgaagat
atctatatttctgcttcccaaattagaagatttgatttacgtaacggagataaagtaacg
ggaaaagtgcgtcctcctaaagaaagtgaacgctactatggccttttacatgttgaatta
gttaatggtgaagatccagaaattgcgaaagaaagagtccattttccaggacttacagca
ctttatccagaccgtcatatcaagcttgaaacagaaccagataaattatcgactcgtatt
atggatttagtagctcctgttggttacggccaacgtggattaatcgttgctccaccaaaa
gctggtaaaactttattgattaaagaaattgccaatgcaattacaacgaatcatccaaac
gccgaactaatcgttttattaatagacgaacgcccagaagaagtaacggacattgagcgt
tccgttaaagcagatgtggtaagttctacatttgatgaagtaccagaaaatcatgtaaaa
gtagcggagcttgttttagaaagagcgatgcgtttagttgaacataaacgcgacgttatc
attttaatggattcgattacgagacttgctcgcgcatacaatttagtaatacctccaagt
ggtcgtacgttatcaggtggtattgatccagcagcattccaccgaccaaaacgttttttt
ggagcggcacgtaatatcgaagaaggcggtagcttaacaattcttgctactgcattagta
gatacaggatcacgtatggacgaagtaatttacgaagagttcaaaggaacgggtaatcta
gaacttcatttagacagaagtcttgcggaacgtcgaattttcccagcgatcgatatccgt
cgctcaggtacacgaaaagaagagcttcttattcctaaagatcaactggacaaactttgg
gcaattcgcaaaaccttctccgattcaggagattttggagaacgtttcttgaaaaagctt
cgtcagtcaaaaacaaacgaagcattcttcgagcaactcgcagtagaaatgaaagcacat
cgtagtggaaaagtgactctataa
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