Psychrobacillus glaciei: PB01_06900
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Entry
PB01_06900 CDS
T06231
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
psyo
Psychrobacillus glaciei
Pathway
psyo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psyo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PB01_06900 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psyo03019
]
PB01_06900 (pnp)
03016 Transfer RNA biogenesis [BR:
psyo03016
]
PB01_06900 (pnp)
Enzymes [BR:
psyo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
PB01_06900 (pnp)
Messenger RNA biogenesis [BR:
psyo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
PB01_06900 (pnp)
Transfer RNA biogenesis [BR:
psyo03016
]
Prokaryotic type
tRNA degradation factors
PB01_06900 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
S1_2
SPATA25
LepB_GAP_N
Motif
Other DBs
NCBI-ProteinID:
QFF98579
UniProt:
A0A5J6SLD7
LinkDB
All DBs
Position
1538636..1540753
Genome browser
AA seq
705 aa
AA seq
DB search
MSEKKVFTYEWAGRPLQVEIGQLAKQANGAVLVRYGDTTVLSVATASKHPKNLDFFPLTV
NYEEKLYAVGKIPGGFIKREGRPSERAILTSRLIDRPIRPLFPDGFRNEVQVISIVMSVD
QNCSSEMAAMLGSSLALSVSDIPFDGPIAGVQVGLIGEDFIINPTVEQMEQSILDLTVAG
TKDAINMVEAGAKEVSEEVVLEAIMFGHSEIVKLIEFQEKVVAEIGKEKKEIALFELDKV
LLEEVKILCEVNLVQAIQVQEKHAREDAISKVKNEVLEKYTEKESTDETLKQIREILDAM
VKDEVRRLITEDKVRPDGRGVAEIRPLSSEVGVLPRTHGSGLFTRGQTQALSICTLGPLG
DVQIIDGIGLEESKRFMHHYNFPQFSVGETGPIRAPGRREIGHGALGERALEAVIPDEND
FPYTLRLVAEVLESNGSTSQASICASTLAMMDAGVPLKAPVAGIAMGLVKKGENYTILTD
IQGMEDHLGDMDFKVAGTSKGITALQMDIKIDGLSRTILEEALEQAKIGRMQILESMLTT
IGEPREKLSKYAPKIVVIKINPDKIRDVIGPGGKQINKIIDETGVKIDTEQDGTIYIASA
DEEMIARAKEIIENIVRVAVVGEYYLGKVKRIEKFGAFVEIFTGKDGLLHISEIQEERTK
NVEDVLKIGDELLVKVIEIDNQGRVNLSRKVVIKEEKERAEQKDQ
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaaagaaagtatttacgtacgaatgggcaggccgcccgttgcaagtagaaatt
gggcaacttgcaaaacaagcgaatggtgcagttctagtaagatatggtgatactactgta
ttatcagtagcgactgcttcgaagcacccgaagaatctagactttttcccattaacagtt
aattacgaagaaaaattatacgctgttggtaaaattccaggtggattcattaaacgtgaa
ggtcgtccttctgaaagagcaattttaactagtcgtttaattgaccgtccaattcgtcct
ttattccctgatggcttccgtaatgaggttcaagtaatttccatcgttatgtctgttgac
caaaactgttcgtcagagatggctgctatgttaggttcttcgttggcacttagcgtatcg
gatattccttttgatggaccgattgcaggagttcaagttggtttaattggagaagatttc
atcattaatccgactgtagaacaaatggaacaaagtattttagatcttactgtagcagga
actaaagatgctattaacatggtagaagctggagcaaaagaggtttctgaagaagtcgtg
ttagaagctattatgttcggacatagtgaaattgttaagttaattgaattccaagaaaaa
gtagttgctgaaatcgggaaagagaaaaaagaaattgctctttttgaattagataaagtg
cttttagaagaagtaaaaattctttgtgaagtaaacttggtacaagctattcaagtgcaa
gaaaagcatgcacgtgaggatgcaattagcaaagttaaaaatgaagtattagaaaagtat
acagaaaaagaatcaacagacgaaacgctaaaacaaattcgtgaaattttagatgcgatg
gttaaagatgaagttcgccgtttaatcacagaagacaaagtgcgtccagatggtcgtgga
gtagctgaaatccgtcctctttcttctgaagttggtgttttacctagaacgcatggttcc
ggattatttacacgtggacaaactcaagcattaagtatttgtacattaggaccacttggc
gatgttcaaattattgatggtattggtctagaagaatcaaaacgtttcatgcatcattat
aacttcccacaatttagcgtaggggaaacaggaccaattcgtgctccaggtagacgtgaa
attggacatggtgcattaggagaacgtgctttagaagcagtaataccagatgaaaatgat
ttcccatatacacttcgtttagtagcagaggtgctagaatcgaatggttctacttctcaa
gcaagtatttgtgcatcgacacttgcaatgatggatgctggtgtaccattaaaagcacct
gtagctggtattgcaatgggtcttgttaaaaaaggcgaaaattacacaatattaactgat
attcaagggatggaagatcatcttggagatatggactttaaagtggctgggacatctaaa
gggatcacagcacttcaaatggacatcaaaattgacggcctatctagaacaatcttagaa
gaagctcttgagcaagccaaaattggtcgtatgcagattttagaaagcatgcttacaact
attggtgaacctcgtgagaaattgtctaaatatgctccgaaaattgtagttattaaaatc
aatcctgataaaatccgtgatgtaatcggaccaggtggaaaacaaattaataaaatcatc
gatgaaactggcgtgaaaattgatactgagcaagatggtaccatttatattgcttcagca
gatgaagagatgattgctcgtgcaaaagaaattattgaaaacattgttcgcgtagctgta
gttggtgaatactatcttggtaaagtgaaacgaattgaaaaatttggagcattcgtagaa
atattcactggtaaagacggcttactgcatatttccgaaattcaagaagaacgtacgaaa
aatgtagaagatgtccttaaaattggcgatgagcttttagttaaagtaattgaaatcgac
aaccaaggccgtgtaaacttatctcgtaaagtagtaataaaagaagaaaaagagcgtgcg
gaacaaaaagaccaataa
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