Psychrobacillus glaciei: PB01_10430
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Entry
PB01_10430 CDS
T06231
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
psyo
Psychrobacillus glaciei
Brite
KEGG Orthology (KO) [BR:
psyo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psyo03009
]
PB01_10430
Enzymes [BR:
psyo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
PB01_10430
Ribosome biogenesis [BR:
psyo03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
PB01_10430
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
MTS
Methyltransf_25
Methyltransf_15
TRM5-TYW2_MTfase
PrmA
Methyltransf_23
Cons_hypoth95
Methyltransf_11
Methyltransf_4
RrnaAD
Motif
Other DBs
NCBI-ProteinID:
QFF99214
UniProt:
A0A5J6SQY5
LinkDB
All DBs
Position
complement(2234203..2235597)
Genome browser
AA seq
464 aa
AA seq
DB search
MTIIKDETFVVEIDNIDYKGNGQAVIWFENDKGFKPRKLKLTIPHTLKGESVQVVVDHPD
KRRRKAMPIEILAASPERTDAPCPHFELCGGCVWQHWTYEGQLKYKTEQVKNALKREGLD
PELVLDTIGMDAPWHYRNKMEFTFSPEGEIGLHEQGNFRKIIPLETCLIAGRNMVDGMLE
VGEWVKEFGLKGYDKDAHDGLLRHLMVRESFATGEMMLALFATKTPDGELVSAVENLVER
IAKKFPNVKSLLWLVNTDWADRTQSEDTHLLAGRDFIYDEMASYRYRLWFDTFFQTNPLQ
AQKLVDLALEMGKPKEDEKMIDLFCGVGTFSLPFAARVKELAGIEIVETSIESAKRNAID
NDLHNTTFLARDARRGLDEMHDHFGFADILLIDPPRGGAGGKVMRRIGRSKPKRIVYVSC
SPDTFATDVAELLPFGYKLQTVQPVDLFPHTVHVECVAWLELEK
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
ttgactattataaaagatgaaacgttcgtcgtagaaattgacaatatagattataaaggc
aatggacaagctgtgatttggtttgagaatgataaaggtttcaaacctagaaaactgaag
ctgacgattccacatacgctcaaaggggagtcagtgcaagtcgtcgtcgatcatcccgat
aagcgaagaagaaaagcaatgcctatagagattctagccgcaagccccgagcggacggat
gcgccttgtcctcattttgagctttgcggaggttgtgtatggcaacactggacgtatgaa
ggtcaattgaagtataagaccgagcaagtgaagaacgcattgaaacgtgaaggattagat
cctgaactggtactggatacgatcggcatggacgccccttggcattaccgtaataagatg
gagttcacgttttcgcctgaaggggaaatcggactgcatgaacaagggaatttccgaaag
atcatcccactggaaacatgtctgattgcaggcaggaatatggtcgatggcatgctggaa
gtaggcgaatgggtaaaagaattcggccttaaaggttatgacaaagatgcacatgatggg
cttcttcgtcatttgatggtgcgggaatcgtttgcgaccggcgaaatgatgttggcattg
ttcgctacgaaaacgcctgacggggaattggtgtctgcagttgaaaatcttgtcgagcgg
atcgcgaagaagttcccaaatgtgaaaagccttctttggcttgtgaacactgactgggcg
gatcgcacacaatccgaggatactcatctgttagcggggcgtgatttcatttatgatgaa
atggcaagctatcgctatcgtctttggttcgatacattcttccagacgaaccctttacaa
gcccaaaagcttgtggaccttgcgttggaaatggggaaacctaaggaagacgagaaaatg
atcgacttgttttgtggtgtcggcacgttctcattaccgttcgctgcacgtgtgaaggaa
ttggcgggaatcgagattgtcgagacatcgattgaatccgcaaaacgcaatgccatcgat
aatgatttgcataacacgacattccttgcccgtgatgcacgtaggggactagatgagatg
catgatcatttcggattcgctgatattctgttgattgacccaccacgtggcggagctggc
gggaaagtgatgcgtcgcattggacgctccaaaccaaaacggatcgtctatgtatcatgc
agtcctgacacatttgcaacggatgtagctgaattgctgccattcggctacaagcttcaa
accgtgcaacctgtcgatttgttccctcatacagtgcatgttgagtgtgttgcttggttg
gagttagagaaataa
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