Psychrobacillus glaciei: PB01_11865
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Entry
PB01_11865 CDS
T06231
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
psyo
Psychrobacillus glaciei
Pathway
psyo02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
psyo00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
PB01_11865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psyo03021
]
PB01_11865
Transcription machinery [BR:
psyo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PB01_11865
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
Exonuc_VII_L
DUF2408
Motif
Other DBs
NCBI-ProteinID:
QFF99467
UniProt:
A0A5J6STB0
LinkDB
All DBs
Position
complement(2513331..2514455)
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AA seq
374 aa
AA seq
DB search
MADKSERTKETEIEVSLEEAKKQLIELGKKNGELTYHDIAEKLAHFELESDQIEEFIDHL
EGKEIELSRKDGDEEDLDRLMKGKEETFDLNDLSVPPGVKINDPVRMYLKEIGRVDLLKA
SEEIALAERIEKGDEEARKRLAEANLRLVVSIAKRYVGRGMLFLDLIQEGNMGLIKAVEK
FDHRKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRVQRQLLQDLGREP
SPEEIGEEMDLPQEKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDADAQSPSDHAAYE
LLKEQLEDVLDTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKL
RHPSRSKRLKDFLE
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaagtccgaacgtacaaaagaaactgaaatcgaagtatcattagaagaagca
aaaaaacaattgattgaactagggaaaaaaaatggtgagttaacttaccatgatatagcc
gaaaaacttgctcattttgagttggagtctgatcagatagaagagttcattgatcatttg
gaaggcaaagaaattgaactgagccgaaaagatggggatgaagaggatttagatcgttta
atgaaagggaaagaagaaacttttgatttaaacgatttaagtgtaccaccaggtgttaaa
ataaatgatccagttcgtatgtacttaaaagaaattggtcgggttgacttattaaaagca
tctgaagaaatcgcactagctgaacgtattgaaaaaggagatgaagaagctagaaaacgt
ctagcggaagcaaaccttcgattagtagtgagtattgcgaagcgttatgtaggacgaggt
atgttgtttttagatttaattcaagaaggaaatatggggcttattaaagctgttgaaaag
tttgaccatcgtaaagggtttaaattcagtacgtacgctacttggtggattagacaagca
attacgcgtgctattgcggatcaagcgagaacaattcgtattccagtgcatatggttgaa
acaatcaataagttaataagagttcaacgtcaattgcttcaagatttaggccgagaacca
tctcctgaggaaataggagaagagatggacttgccgcaagaaaaggttcgtgaaatttta
aaaattgcacaagagccagtttctttggaaacaccaatcggagaagaggatgattcgcat
ttaggtgattttatcgaagatgcagatgcacaatctccatccgaccatgctgcgtatgaa
cttttaaaagagcaattagaagacgttttggataccttaacagaccgtgaagaaaatgta
cttcgtttacgttttggtttagatgatgggcgtacaagaacattagaagaagtggggaaa
gtgttcggcgtaacccgtgaacgtattcgtcaaatcgaagcgaaggcacttcgaaaactt
cgccatccatctagaagtaaacgtttaaaagactttttagaataa
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