Psychrobacillus glaciei: PB01_12165
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Entry
PB01_12165 CDS
T06231
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
psyo
Psychrobacillus glaciei
Pathway
psyo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psyo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PB01_12165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psyo03400
]
PB01_12165
Enzymes [BR:
psyo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
PB01_12165
DNA repair and recombination proteins [BR:
psyo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PB01_12165
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
AAA_11
Viral_helicase1
AAA_22
HHH_5
AAA_25
AAA_12
nSTAND3
AAA
AAA_16
AAA_29
HHH
AAA_28
NTPase_1
UvrD-helicase
TsaE
DUF815
DUF4926
Motif
Other DBs
NCBI-ProteinID:
QFF99522
UniProt:
A0A5J6SPD8
LinkDB
All DBs
Position
complement(2573935..2576352)
Genome browser
AA seq
805 aa
AA seq
DB search
MTNEMNNEKQFITGRPIVSIFHNPQNLFSIIKLKIKSTNTTYIEKEIIVTGYFPQLVLEE
SYKFTGLVKNHPKYGVQFQVETFQKEVPATEQGIVHYLSSDMFPGIGRKTAEQIVKKLGQ
NAINRILDDPAVLDIIPRLAEDKKQTLRAVLEQNLGLEKVMIQLNEWGFGPQIAMKIYQA
YREETIDVLTKNPYRLIEEVEGVGFIRADELGYKLGIQGNHPDRIKAAIFHLLQSASLSE
GHVFLYAEQLLESVKRLLESAQREEITFEAITKCCFELAEESRIVGEVNRFYIPSLYFSE
VGISSKIETLLNENDTHHKFPLAEMKKHLGGIEERLGVQYATTQVKAIETAINASMTLLT
GGPGTGKTTVVRGIVELYAELHGLSLEPKEWAKDKKPFPVVLAAPTGRAAKRLSESTGLP
AMTIHRLLGFNGQEDADSEGKEIEGKLIIIDETSMLDTWLGHQLLKAIPKDAQVIFVGDQ
DQLPPVGPGQVLKDLLASKRIPTVELIDIYRQSEGSSIIELAHEMKKGTVPKTLLDKTKD
RSFIKASTEQIPKVVEQVLKSALAKGHSIRDIQVLAPMYRGPAGIDALNKMMQEMVNPNT
DGKRKEMVFGETIYRIGDKVLQLVNQPESNVFNGDMGEVVSIFKAAETVEKKEMLVISFD
GNEVTYEKNDLNQITLAYCCSVHKSQGSEFQTVIMPVTRSYMKMLRRNLLYTGITRAKNF
LILCGDPEVFKFGVERTDDLQRLTTLKDRLSVSEEKKEKIDEQREKVMDEITTETTFLSA
ENCHLIDPLTGMNGISPYDFLEMDN
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgacaaacgaaatgaataatgaaaaacaatttattacgggtcgtcctatcgtctcaatt
tttcacaatccccaaaatttgttttctattataaaactaaaaattaaatccactaataca
acctacatagaaaaagaaataattgtgaccggttattttccacaactcgtattagaagaa
tcctataaatttactggacttgtaaaaaatcaccctaaatatggcgtgcaatttcaagta
gagacctttcaaaaagaagttcctgctactgaacaaggtatagtccattatttatcgagt
gatatgtttccgggaatcggcagaaaaacagcagaacaaattgtcaaaaaacttggtcaa
aatgccatcaatagaattctagatgaccctgctgtattggacatcattccaagattggca
gaagataaaaaacaaacattgagagctgttttagagcaaaatctaggtttagaaaaagtg
atgattcagttgaatgaatgggggttcggtccccaaatcgcgatgaaaatatatcaagct
taccgagaggaaacgatagatgtattgacaaagaacccatatcgccttatcgaggaagtg
gaaggcgttggatttattcgggcagatgaactgggctataaacttggcattcaaggaaat
caccctgatcgtattaaagctgccatttttcacttattgcaatctgcttcattaagtgaa
ggtcatgtatttttatacgcggagcaattacttgaatctgttaaaagattattagaaagt
gcacaaagagaagaaatcactttcgaagcgataacgaagtgctgcttcgaattagccgag
gaaagtcgaattgttggggaagtgaatcgtttttacatcccttcactttatttttcagaa
gtagggataagttctaaaatcgaaacgttattgaatgaaaatgatactcaccataaattc
ccccttgctgagatgaaaaaacaccttgggggaattgaagaaagattaggcgtccaatat
gcaacaacccaagttaaagcgatcgaaacggctataaatgccagcatgacactcttaaca
ggtggacctgggacagggaagaccaccgtcgtacgaggaatagttgaattatatgcagaa
cttcatggactttctttagaaccaaaagaatgggcaaaagataaaaaaccatttcctgtt
gtattggctgcacccactggtagagccgcaaaacgtttaagcgaatctaccggattgcca
gcaatgacaatccaccgcttattaggatttaacggccaggaagatgcggattctgaagga
aaagaaattgaaggaaaactaattattatagatgaaacatccatgttagatacttggcta
gggcatcaattattaaaagctattcctaaagatgcacaagtcatttttgtaggggaccaa
gaccagttacctcctgttggaccagggcaggtattaaaagatttattagcttctaaaaga
atcccaactgttgaattaatagatatttatcgccaatcagaaggttcttctattattgag
ctagctcacgaaatgaaaaaaggaactgttccgaaaacgctgttagacaaaacgaaagat
cgttcatttattaaagcttctacagaacaaattccgaaagtagtagaacaagtgttgaaa
agtgctttagcaaaaggacattcgataagagatattcaagtacttgcacctatgtataga
gggccagctggtatcgatgcattaaataaaatgatgcaagaaatggtgaatccaaataca
gatggaaaacgaaaagaaatggtatttggagaaacgatttaccgtattggcgacaaagta
ttgcaactcgtcaatcagccagaaagcaatgtgttcaacggagacatgggggaagtcgta
agtattttcaaagccgctgaaacagtggagaaaaaggaaatgctagttatttcgtttgat
ggcaatgaagtgacgtatgaaaagaatgatttgaatcaaattactttagcgtattgttgc
tccgtgcataaatcccaaggtagtgaatttcaaaccgtgattatgcctgtcaccagaagc
tatatgaaaatgcttcgaagaaatttattatatacaggcattacaagagcaaagaacttt
ttaatattatgtggagatcccgaagtttttaaatttggagtagaacgtactgatgatttg
caacgattaacaactttaaaagatcgtttaagcgtcagtgaggaaaagaaggaaaaaata
gatgaacagagagaaaaagttatggatgaaataacaacagaaacaactttcttatctgca
gaaaattgccatttaattgatccgttaaccgggatgaatggaatttccccatatgatttc
ttagagatggataattga
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