Psychrobacillus glaciei: PB01_13345
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Entry
PB01_13345 CDS
T06231
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
psyo
Psychrobacillus glaciei
Brite
KEGG Orthology (KO) [BR:
psyo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psyo03016
]
PB01_13345 (thpR)
Enzymes [BR:
psyo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
PB01_13345 (thpR)
Transfer RNA biogenesis [BR:
psyo03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
PB01_13345 (thpR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
HVSL
SeleniumBinding
Motif
Other DBs
NCBI-ProteinID:
QFF99745
UniProt:
A0A5J6SP91
LinkDB
All DBs
Position
complement(2838009..2838554)
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AA seq
181 aa
AA seq
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MNTHYFIGIKIPSNLATSIVEARDTTNLHETHKILPVAEDLHITLYYLGQIEQNSVDQII
QSLDQNIDWKSFDLTTNGISHFGNNLTPRVVYTALKESESLTLLQEKVTRTISNYIEVDN
RKEFNAHITIAKKWASKGLLSMENFPLESTTFKVTNISLFRVSPTNTPRYEELYIMHSGG
G
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgaacacacattattttataggtattaaaattccgagtaatcttgcaacttctatcgtt
gaagcaagagatacaactaatttgcatgaaacgcataaaatattgcctgttgcggaggac
ttgcatattacgctctattatttaggccagattgagcaaaattctgtagatcaaataatc
cagtcgttagatcaaaatatcgactggaaatcttttgatctaacgacgaatggaatctct
cattttggaaataatctcactccgagagtagtatatacagcactaaaagaaagtgaatct
ttaacattattgcaggaaaaggttactagaacaatttctaattatatagaagttgataat
cggaaagagtttaatgcccatattacgatagccaaaaaatgggcctctaaaggattacta
tccatggaaaattttcctcttgaaagtacaacctttaaggttactaatatctctttattt
agagtaagtccaactaatacacctcgctacgaggaattatatatcatgcatagtggggga
ggttaa
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