Psychrobacillus glaciei: PB01_14820
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Entry
PB01_14820 CDS
T06231
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
psyo
Psychrobacillus glaciei
Pathway
psyo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
psyo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PB01_14820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psyo03400
]
PB01_14820
DNA repair and recombination proteins [BR:
psyo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PB01_14820
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PB01_14820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_29
nSTAND1
RsgA_GTPase
AAA_16
AAA_21
DnaJ_CXXCXGXG
AAA_33
nSTAND3
AAA_22
ATPase_2
AAA_23
ATPase
NACHT
Viral_helicase1
cobW
DUF2972
Septin
Motif
Other DBs
NCBI-ProteinID:
QFF99993
UniProt:
A0A5J6SR67
LinkDB
All DBs
Position
complement(3123564..3126455)
Genome browser
AA seq
963 aa
AA seq
DB search
MKNQEIVIQGARAHNLKNVSLKIPRDKLVVMTGLSGSGKSSLAFDTIYAEGQRRYVESLS
AYARQFLGQMDKPDVDVIEGLSPAISIDQKTTSKNPRSTVATVTEIYDYLRLLFARVGKP
ICPTHGIEISSQTIEQMVDRLSEYAEKTRMQVLAPIVSGRKGTHVKLLEDMKKQGYVRVR
VDGELMDLDDDINLDKNKKHNIEVVIDRIVMKEGVAPRLSDSLESALRIADGRVLIDVME
HEEILFSEHHACPICGFSIGELEPRMFSFNSPFGACPECDGLGTKLEVDPELVVPDKTLT
LEEGAIIAWQPTSSQYYPKLLEAVCKHYKIKMKVPVEKLPIDQWNKIMYGSGEDKIHFRY
ENEFGQVRDSKIQFEGVLSNIERRYKDTSSDYIREQMEKYMAQHNCPTCKGYRLKEETLA
VKVDSLHIGQVTEFSIEEANRFFNQLTLSEKDMQIARLVFREINERLGFLENVGLDYLTL
NRASGTLSGGEAQRIRLATQIGSRLTGVLYILDEPSIGLHQRDNDRLIETLKNMRDIGNT
LIVVEHDEDTMMAADYLIDVGPGAGIRGGEIVAAGTPEQVMKNKKSLTGQYLSGKKFIPL
PTERRKPDGRFIKIKGASENNLKNVNVDIPLGVFTAVTGVSGSGKSTLVNEILYKSLAQK
LNRSKVKPGANKSIEGIEELEKVIEIDQSPIGRTPRSNPATYTGVFDDIRDLYAATNEAK
VRGYKKGRFSFNVKGGRCEACRGDGIIKIEMHFLPDVYVPCEVCHGKRYNRETLEVHYKG
KNIAEVLKMTVEDGLAFFENHPKISRKLQTIVDVGLGYMELGQPATTLSGGEAQRVKLAS
ELHKRSNGKSFYILDEPTTGLHVDDIARLLVVLQRLVENGDSVLVIEHNLDVIKTADYMI
DLGPEGGDKGGMIIGVGTPEKIAETKDSYTGKYLKTILERDRGRMDEVILKATKKKKVAV
ESK
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaaatcaagagattgttatacaaggtgctcgcgcacataatttaaaaaatgtaagt
ttaaaaataccaagggataagcttgttgtaatgaccggcttatctggttctggaaaatcc
tctctagcatttgatacgatttatgcagaaggacaaagacgttatgtcgagtcattatcg
gcttatgcacgacaatttttagggcagatggataaaccggatgtagatgtaattgagggt
ctttcacccgccatatccattgaccaaaaaacgacgagtaaaaatccacgttctacggtg
gcgactgtaacggaaatttacgattatttgcgtctattatttgctcgagttggaaaaccg
atatgccccacacacgggattgagataagttcacaaacaattgagcaaatggtcgatcgt
ttgagcgagtacgctgaaaaaacacgtatgcaagtattagctcccatcgtatcaggcaga
aaaggcactcatgtaaagttgctggaagatatgaagaagcaaggatatgtacgtgttcga
gttgacggtgagttaatggatttggatgacgatatcaatttagataaaaataaaaagcat
aatatagaagtagtgattgaccgaattgtgatgaaagaaggcgtagcacctcgtttaagt
gattcgttggaatccgcacttcgaattgcagatggaagagtattaattgatgtgatggaa
catgaagaaatattatttagtgagcatcatgcatgtcccatttgcggtttttctatcggt
gagttagaaccacgtatgttttctttcaacagtccatttggtgcatgcccagagtgtgat
gggttaggaacgaaactagaagtggatccagaattagttgttcccgataaaacactaaca
ctcgaagaaggggctattatcgcctggcaaccaacaagttcccagtattatcccaagtta
ttagaagcggtatgcaaacattacaaaattaaaatgaaggtacctgtggagaaattgcca
atcgaccagtggaataagattatgtatggctcgggagaagataaaatccattttcgctat
gaaaatgaatttgggcaagtaagagacagcaagattcaatttgaaggggttttatctaat
attgaacgtcgatataaagatacatcctctgattatattcgtgaacaaatggaaaaatat
atggctcaacataattgccctacttgtaaaggctatcgattaaaagaagaaacccttgca
gtaaaagtggattccttacatataggtcaagtaacggagttttcgattgaagaagcaaat
cgattttttaatcagttaacactatcagaaaaagatatgcaaattgcacgattagttttt
agagaaattaatgaacgccttggctttttagaaaatgtcggtctagattacttaacgttg
aatcgtgcatcgggtacattatctggtggagaagcacagcgcattcgtctagctactcaa
ataggatcaaggcttacaggggttttatatattttagatgaaccttccattggtttacac
caaagagataatgatcgattgatcgaaactttaaagaatatgcgtgatattggaaacaca
ctgatagtagtagagcatgatgaagacacaatgatggcagccgattatttaatcgatgtt
ggccctggtgctgggattcgtggaggagaaatcgtcgctgcaggcacacctgaacaagta
atgaaaaataaaaaatcactaacgggtcagtatttaagtggaaagaaattcatcccttta
ccaacagaaagaagaaagccagatggtcgttttatcaaaattaaaggggcttctgaaaat
aacttaaaaaatgtcaatgtagatattcctttaggggtatttacagcagtaactggtgtt
tctggttcagggaaaagtacacttgtgaatgaaattctttataagtcgcttgcacaaaag
cttaaccgatctaaagtgaaaccgggggcaaacaaaagcatagaaggaatagaggaattg
gaaaaagtaattgagattgaccaatctcctatcggacgaacaccaagatcaaatcccgct
acttatacaggagtatttgatgatatccgtgacttatatgcagcgacaaatgaagcaaaa
gtaagagggtataaaaaaggtaggtttagttttaacgtaaaaggtggacgctgtgaagca
tgtcgcggagatggaattattaaaattgaaatgcactttttaccagacgtctatgtacct
tgtgaagtttgtcatggaaaacggtataatcgggaaacattagaagtacattataaaggg
aaaaatatagcggaagtattaaaaatgacagtggaggatggattagcgttttttgaaaac
catccaaaaattagccgtaaattacaaactattgtggacgttggtctaggatatatggag
ttaggtcaaccagctacgacactctcagggggagaagcccaacgtgtaaaacttgcttcc
gagttgcataaaagatccaacggaaaatcattttatattctcgatgagccaacaactggt
ttgcacgtagatgatattgcacgtttacttgtggtactacaacgtcttgtagaaaatggg
gactccgtactagttattgaacataatttagatgtgattaagacagcggattatatgatc
gatttgggtcccgaaggcggcgacaaaggtggaatgattattggagtaggcacaccggaa
aaaatagctgaaacaaaagactcttacacagggaaatatttaaaaaccattttggaacgc
gaccgagggagaatggacgaagtaatattaaaagcgactaaaaagaaaaaagttgcagta
gaatccaagtga
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