Psychrobacillus glaciei: PB01_16450
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Entry
PB01_16450 CDS
T06231
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
psyo
Psychrobacillus glaciei
Brite
KEGG Orthology (KO) [BR:
psyo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psyo03009
]
PB01_16450
Enzymes [BR:
psyo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
PB01_16450
Ribosome biogenesis [BR:
psyo03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
PB01_16450
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
Methyltransf_25
PrmA
TRM5-TYW2_MTfase
MTS
Cons_hypoth95
Methyltransf_15
RrnaAD
Methyltransf_11
Methyltransf_32
TPMT
Methyltransf_12
N6_N4_Mtase
Methyltransf_4
Motif
Other DBs
NCBI-ProteinID:
QFG00272
UniProt:
A0A5J6SQN5
LinkDB
All DBs
Position
complement(3422966..3424360)
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AA seq
464 aa
AA seq
DB search
MEESKLERRNKVNTPVTKNDRITVHIEDLTHDGAGVAKVDGYPLFIPGGLPNETAEIHVL
KTLKNYGFAKLINIVEASPFRVKAPCPVFSECGGCQLQHMTNEGQLVWKENMVKNVLKRI
GKIDAPVLPIKGMEKPWEYRNKSQIPFDLENGQVVAGFYQSKSHRIADTNTCLIQSDSAD
RLLRAVKEKALELDLIPYNEETRKGQLRHLVVRKARKTGEVMVVLVTKHPKLSKKDALIE
FIQTIEPNVTSIIQNVNNRHTNVIFGDETNVLWGKAVIEDQIGDVRFEISARSFYQVNPE
QTEVLYKQALDYAQLSGDETVIDAYCGIGTISLFLAQKAKQVLGVEIVPQAIEDAKRNAE
LNGFTNTYFEAGPAEEVIPKWYKEGKSADVLVVDPPRKGCDEALLNTIIEQRPSRVVYVS
CNPATLARDLRILEDGGYKTVEVQPVDMFPQTTHVECVALIELK
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atggaggaatcaaaactagaacggagaaataaagtgaatacaccagtaaccaaaaatgat
cgaatcacggttcatatagaagacttaacgcatgacggagcaggggttgcaaaagtcgat
ggatatccactattcataccaggtggtctgccaaatgaaacagcagaaatccatgtgtta
aaaacattaaaaaactatggctttgcaaaattaataaatatcgtagaggcatcgccattt
cgagtaaaagcaccatgtcctgtattctcagaatgtggaggctgtcagctgcaacatatg
acaaatgaaggacagcttgtttggaaagaaaatatggtgaagaatgtcttgaaaagaatc
ggaaaaatcgatgcacctgttttaccgattaagggaatggagaaaccatgggaatatcgc
aataaatcacaaatcccattcgatttagaaaatggacaagtggtggcaggtttttaccaa
tctaaatcgcatcgcatagcagatacgaatacttgtttaatccaatccgattcggcggat
cgattgctacgtgctgtgaaagaaaaagcattagaactggatttaatcccatacaatgaa
gaaacgagaaaaggccaactacgtcatcttgtcgtacgtaaagctcgtaaaacaggggaa
gtaatggttgttttagtaaccaaacatccgaagttatcgaaaaaggatgccttaattgaa
ttcattcaaacaatcgaaccaaatgtaacgtccattattcaaaacgtgaacaatcgacat
acgaatgttatttttggagatgaaacaaatgtactttggggcaaagcggttattgaagat
caaataggggatgtaagatttgaaatatctgctcgttcattctatcaagtaaacccagaa
caaacagaagtactatataagcaagcgctcgattacgcacagctctcaggagatgaaaca
gtaattgatgcatattgtggaatcggtaccatttctttattcttagcacaaaaagcaaaa
caagtactaggagtggaaatcgtcccacaggcaatagaagatgcaaaacgaaatgccgaa
ttgaatggcttcacaaatacgtattttgaggcaggacctgcagaagaagttattccaaag
tggtataaagaaggcaaaagtgcagatgtactagtagtggatccaccaagaaaaggatgc
gacgaagcattgctaaacacgatcatcgaacaacgtccaagtcgagtggtttatgtatct
tgtaacccagcgacgcttgcacgtgatctaagaattttagaagatggtggatataaaaca
gtggaagtacagccagttgatatgtttccacagacgacgcatgttgagtgtgtggcgttg
atagagttaaagtag
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