| Entry |
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| Symbol |
rpoC
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| Name |
(GenBank) DNA-directed RNA polymerase subunit beta'
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| KO |
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| Organism |
psyo Psychrobacillus glaciei
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:psyo00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PB01_19900 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:psyo03021]
PB01_19900 (rpoC)
03400 DNA repair and recombination proteins [BR:psyo03400]
PB01_19900 (rpoC)
Enzymes [BR:psyo01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PB01_19900 (rpoC)
Transcription machinery [BR:psyo03021]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
PB01_19900 (rpoC)
DNA repair and recombination proteins [BR:psyo03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
PB01_19900 (rpoC)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
complement(4142635..4146237)
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| AA seq |
1200 aa
MIDVNNFEYMKIGLASPDKIRSWSYGEVKKPETINYRTLKPEKDGLFCERIFGPTKDWEC
HCGKYKRVRYKGVVCDRCGVEVTRSKVRRERMGHIELAAPVSHIWYFKGIPSRMGLILDM
SPRSLEEVIYFASYVVIEPADTPLEKKQLLSEKEYRAYRDKFGTKFQAAMGAEAIKRLLQ
ELDLESETESLKEELKTAQGQRRTRAIKRLEVVESFRNSGNKPDWMVLDVLPVIPPELRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPSIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPNLKMYQCGLPKE
MAIELFKPFVMKELVERGLAHNIKSAKRKIERMHAEVWDVLEDVIREHPVLLNRAPTLHR
LGIQAFEPTLVEGRAIRLHPLVCTAYNADFDGDQMAVHVPLSAEAQAEARLLMLAAQNIL
NPKDGKPVVTPSQDMVLGNYYLTLERKGATGEGSTFYGPEEVLIAYNTGHVHLHTRIAID
ASSLKNQTFTEEQNKMLLTTTVGKVIFNEILPETFPYINEPTDFNLQIETPSNYFVSTNT
DIKKHIEAMDLIQPFKKKILGNIIAEVFKRFHITETSKMLDRMKALGFKYSTKAGITIGI
SDIVVLPDKGEILEEAQGKVDKVIKQFRRGLITEEERYASVIGHWSKAKEIIQDKLMKSL
DNSNPIFMMSDSGARGNASNFTQLAGMRGLMANPAGRIIELPIKSSFREGLTVLEYFIST
HGARKGLADTALKTADSGYLTRRLVDVAQDVIVREEDCGTDRGLLIGSLMEGTEVIEEFG
ERIVGRHTKKTIFHPTTNEVILVKDGLITQDVARIIEEAGLKELTIRSAFTCNTKHGVCK
KCYGLNLATGDTVEVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRIQEIF
EARNPKGQAVISEITGIVTEIDEIREGQKEITIQGNVETRKYLAPYNARIKVQVNDTIQR
GQVLTEGSTDPKELLKVKDVSTVQVYLLKEVQKVYRMQGVEIGDKHIEVMVRQMLRKIRV
IEAGETELLPGSLLDIHQFAEANKDAVLQGKIPATCRPVILGITKASLETESFLSAASFQ
ETTRVLTDAAIKGKRDELLGLKENVIIGKLVPAGTGMQRYRQIQITSNKADKGKETISTD |
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| NT seq |
3603 nt +upstreamnt +downstreamnt
ttgatagatgttaataattttgagtatatgaaaattggtttagcttcacctgataaaatt
cgctcttggtcttacggggaagttaaaaaacctgaaacaatcaactatcgaacattaaaa
cctgaaaaagatggtttgttctgtgaacgtatttttggtcctactaaagactgggaatgt
cactgtggtaaatacaaacgagttcgttataaaggtgtagtatgtgatcgatgtggagta
gaagtaacacgttcaaaagtacgtcgtgaacgcatgggacatatcgaattagcagcacca
gtttcacatatttggtatttcaaaggtattccaagtcgtatgggtctaattttggatatg
tctccgagatcccttgaagaagtaatttattttgcttcctatgtggtaattgaacctgct
gatacaccacttgaaaagaaacaattactttctgaaaaagaatatcgtgcataccgtgat
aagtttggtacaaagttccaagctgctatgggtgcagaagcaattaaacgtctacttcaa
gaacttgatttagagagtgaaacagaaagcttaaaagaagagctgaaaactgcacaaggt
cagcgtcgtacacgtgctattaaacgcttagaagtagtagagtctttccgtaattcagga
aataagccagattggatggttttagacgtacttccggtaattcctccagaattgcgtcca
atggttcaattagatggtggacgatttgctacatctgatttaaacgatttatatcgtcgt
gttattaaccgtaataaccgcttaaaacgtttacttgacttaggtgctccaagtattatc
gtacaaaatgaaaaacgtatgttacaagaagctgtagatgctttgattgataatggtcgt
cgtggtcgtccggttacaggaccaggtaatcgtccattaaaatcactctctcatatgttg
aaagggaaacaaggtcgtttccgccaaaacttacttggtaaacgtgtagactattctggt
cgttcggttatcgtagtaggacctaacttaaaaatgtatcaatgcggtcttccaaaagaa
atggctattgaattatttaaaccatttgtaatgaaagaactagttgaacgtggcttagct
cacaacattaaaagtgctaaacgaaaaattgaacgtatgcatgctgaagtatgggatgta
ttagaagacgtcattagggagcatccggttttattaaaccgagcacctactcttcaccgt
ttaggtattcaagctttcgaaccaacattagtagaaggccgtgcaattcgtcttcaccct
cttgtgtgtacagcttacaacgctgactttgatggtgaccaaatggcagttcacgttcct
ttatcggcagaagctcaagcggaagcccgtttattaatgcttgcagcacaaaacattttg
aacccgaaagatggaaaaccagttgttacaccttctcaagatatggttttaggaaactat
tacttaacacttgagcgaaaaggggcaacaggagaaggttctactttctatggtccagaa
gaagtattaatcgcatataacactggtcatgtacatttgcatacacgtatcgcaattgat
gcatcatcacttaaaaaccaaacatttacggaagaacaaaacaaaatgttgttaacaaca
actgttggtaaagtaatttttaatgaaatattaccagagacgttcccgtatattaatgaa
ccaactgacttcaatttgcaaattgaaactccatcaaactactttgtttctacaaataca
gatataaagaaacatattgaggcaatggatcttatacaaccattcaagaaaaagatcctt
ggaaatatcattgcagaagtatttaaacgtttccatattacagaaacttcgaaaatgcta
gaccgcatgaaagcacttggatttaaatattctactaaagctggtattacaatcggtatt
tctgatatcgtggtacttccagacaaaggtgaaattctagaagaagcgcaaggtaaagta
gataaagtaattaaacaattccgtcgtggtttaatcactgaagaagagcgttatgcaagt
gtcataggacattggagtaaagcaaaagagattattcaagacaaactgatgaaatccctt
gataattctaacccaattttcatgatgagtgattcaggtgcccgtggtaacgcatctaac
tttacgcaacttgcaggtatgcgtggtcttatggccaatccagctggacgaattatcgaa
cttccgatcaaatcatcgttccgtgaaggtttaacagttcttgaatacttcatctcgact
catggtgctcgtaaaggacttgctgatactgcacttaaaactgccgattcaggttacttg
actcgtcgacttgttgacgtagctcaagatgtaattgttagagaagaagactgtggaact
gaccgtggattactaataggttcacttatggaaggcacggaagtaattgaagagtttggt
gaacgtattgtcggtcgtcatacgaagaaaacaatcttccatccaacaacgaatgaggta
atcctagtgaaagacggtttaattacacaggatgtcgctcgcattattgaagaagcgggt
ctcaaagagttaacaatccgttcagcgtttacatgtaatacgaagcacggtgtttgtaaa
aaatgttacggtctcaacttagctactggagacactgtagaagttggagaagcggttggt
attattgctgctcaatcaatcggagaaccaggtacgcagttaacgatgcgtacattccat
acaggtggggttgccggagatgatattactcaaggtcttccacgtatccaagagattttt
gaagctcgtaatccaaaagggcaagctgttatttcagaaattacaggtattgttactgaa
attgatgaaattagagagggccaaaaagaaattacaattcaaggtaatgtagaaactcgt
aaatatttagcgccttataatgcgcgtataaaagttcaagtaaatgatacaattcaacgt
ggacaggtattaacggaaggttctactgatccaaaagaattattgaaagtaaaagacgtt
tctaccgttcaagtgtacttattaaaagaagtacaaaaagtttatcgtatgcaaggggta
gaaattggtgataaacacatcgaagtaatggtacgtcaaatgcttcgtaagattcgtgtc
attgaagctggtgaaacggaattacttccaggctcgctgcttgatattcatcaatttgct
gaggcaaataaggatgcagttttacaaggtaagatccctgcaacttgtcgcccagtaatt
cttggtattacgaaagcttctctagaaacagaatcattcttatctgcagcatcattccaa
gaaacgactcgtgtcttaacggatgcagcgattaaagggaaacgtgatgaattactagga
ttaaaagaaaatgtaattattggtaaactagttccagctggaacgggtatgcaacgttat
cgtcagattcagattactagtaataaagcggataaaggaaaagaaacaataagcactgat
taa |
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