Psychrobacter sp. PAMC27889: E5677_01115
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Entry
E5677_01115 CDS
T06076
Name
(GenBank) exonuclease
KO
K10857
exodeoxyribonuclease X [EC:3.1.11.-]
Organism
psyp
Psychrobacter sp. PAMC27889
Pathway
psyp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
psyp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
E5677_01115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psyp03400
]
E5677_01115
DNA repair and recombination proteins [BR:
psyp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
E5677_01115
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_T
QSregVF_b
ExoX-like_C
Motif
Other DBs
NCBI-ProteinID:
QCB29694
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Position
255295..255993
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AA seq
232 aa
AA seq
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MTEVFNIANTALVIDTETDQGRDPRPIQIATINVMTGFEWMKYFNSGRTISPIVIKVHGI
TDDDVAGLERFNLAEFELPEYLIGHNVRFDWRVIGSPSAKLICTVRLARVAFPEWRAYGQ
SKCIEQLLGKEEASRMTIAAHDALGDARMCYLLYQACCERLEIAPTDFAAAHAIANKANP
VSKMPFGKHKGTPIKDVPISYVKWMLGNIHNMQPSLYSALTKRVMAEEAKDK
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgacagaggtttttaacatcgcgaacacagcactggtgatcgatactgaaaccgatcaa
gggcgtgatccaagaccaatccaaattgcgaccatcaatgtaatgactggttttgagtgg
atgaagtactttaatagcggtcgcactatatcgcctatcgtcatcaaggtacatggcatt
accgatgacgatgttgcagggcttgagcgctttaatttggctgagtttgaattgccagag
tatctgattggtcataacgtgcgctttgattggcgagtaatcggcagtccttctgctaag
ctgatttgtacggttaggttggcacgcgtggcttttccagaatggcgtgcttatgggcaa
tctaaatgtattgagcaactactcggtaaagaagaggcaagccgtatgacgattgccgct
cacgacgcgctcggtgatgctcgtatgtgttatctgctgtatcaagcgtgctgtgagcgc
ttagagattgcaccgacagattttgccgccgctcatgcgattgctaacaaagccaatccc
gtcagtaaaatgccgtttggtaaacataaaggcacgccaattaaagacgtacctattagc
tatgtaaaatggatgctcggtaatattcataatatgcagccgtcgctgtattctgcgttg
accaaacgggttatggcagaagaagcaaaggataaatag
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