Psychrobacter sp. PAMC27889: E5677_02445
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Entry
E5677_02445 CDS
T06076
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
psyp
Psychrobacter sp. PAMC27889
Brite
KEGG Orthology (KO) [BR:
psyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psyp03016
]
E5677_02445
Enzymes [BR:
psyp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
E5677_02445
Transfer RNA biogenesis [BR:
psyp03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
E5677_02445
Prokaryotic type
E5677_02445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
QCB32000
LinkDB
All DBs
Position
complement(562426..563625)
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AA seq
399 aa
AA seq
DB search
MTTNSPSAFTEAASNISNIDITAATDTSQLPQPVKPPLAQASYKTHATDFIVNEILPLEF
TNDGEHLWLHIQKSGVNTAYLAKLLSEWADIPLRDVGYSGLKDRHAVTTQWFSLRIPKKQ
LPTTEFAPEDIGDNESVIILAQHWHNKKLNRGTHRANEFIITLRNVQCEELATKTPEQTR
LAKQHLEQHLKTISATGVPNYFGPQRFGREGNNVREALALFARPPREARPQPKKSKRKRA
PREQNTMELSAARSLIFNEILAARVRDGSWNQGLAGEVFNLDGSGSIFTSEEIDDTLRAR
LNSGDIHPTGVLWGTDNDKVSATAATIENSTVQNNPLLSQLATGLEKRDIKAQRRALRLP
IEALSWHWDDEETLVLSFTLTTGSFATSVLASVVQQLTT
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgacgactaactctccctccgctttcacagaggctgcatccaatatttcaaatatagat
atcacagctgctacagatacctcgcaattgccacagccagtcaaaccaccgctagcacaa
gcgagttataaaacccacgccacggactttatcgtcaacgagatactgccgttggaattt
actaatgatggtgagcatttatggctacatattcaaaagtcaggcgtgaataccgcttat
cttgccaaattattgtcagagtgggctgatattccattacgtgatgtgggttattcagga
ctcaaagaccgtcatgcagtgacaacgcagtggtttagcctacgaataccaaaaaagcaa
ctgcccacgactgaatttgctccagaggatatcggcgacaatgagtcggttatcattctt
gcccagcattggcacaataaaaaactgaaccgcggcacgcatagagccaatgaatttatt
attactttgcgtaatgttcaatgtgaagaattagccactaaaacgccagagcaaacacgc
cttgccaagcagcacctcgaacaacatttaaaaaccatcagtgcaactggtgtgcccaat
tattttgggccacagcgctttggtcgtgaaggcaataatgtgagagaagcattggcactg
tttgcgcgcccaccgcgcgaggcaagaccacaacccaagaagagcaaacgcaagcgtgca
ccacgtgagcagaacaccatggagctgtccgcagcccgtagcttgatatttaatgagata
ttggcagcgcgagtccgtgatggcagttggaaccagggtctagcaggtgaagtatttaac
ttagatgggtcgggatcgatatttactagcgaagagatagatgacacgttacgcgcgcgt
cttaacagcggtgatatccatccaacgggcgtcttgtggggtacggataatgacaaggtc
agtgctacagcagccaccatcgaaaacagcactgtccaaaacaatccgctactatcacaa
ctggcaacaggcttagagaaacgcgatataaaagcgcaacgacgcgcgctacgtctgcct
atcgaggcactatcttggcattgggatgatgaggagacattggtactgagctttacgttg
acaaccggtagctttgcgaccagcgttttagcaagcgtggtacagcaattaactacctaa
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