Psychrobacter sp. PAMC27889: E5677_05395
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Entry
E5677_05395 CDS
T06076
Name
(GenBank) hypothetical protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
psyp
Psychrobacter sp. PAMC27889
Pathway
psyp00061
Fatty acid biosynthesis
psyp00071
Fatty acid degradation
psyp01100
Metabolic pathways
psyp01212
Fatty acid metabolism
psyp02024
Quorum sensing
psyp04146
Peroxisome
Module
psyp_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
psyp00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
E5677_05395
00071 Fatty acid degradation
E5677_05395
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
E5677_05395
09145 Cellular community - prokaryotes
02024 Quorum sensing
E5677_05395
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
psyp01004
]
E5677_05395
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psyp04147
]
E5677_05395
Enzymes [BR:
psyp01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
E5677_05395
Lipid biosynthesis proteins [BR:
psyp01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
E5677_05395
Exosome [BR:
psyp04147
]
Exosomal proteins
Exosomal proteins of breast milk
E5677_05395
Exosomal proteins of breast cancer cells
E5677_05395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
QCB30473
LinkDB
All DBs
Position
complement(1274414..1276330)
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AA seq
638 aa
AA seq
DB search
MGTLLSTKPLGGCHQCGRRQKSMRASLSLYRDVRDGCYRRSPSPQNNHLTDRTVKPQSSE
DEMTPIYTAICEHARKAPKQVAIKTIEGEHTVSLTYDELQRTLALLHQTLHTWQGKRVAL
YAHNEIDWVILDLALSTIGAVVVPIPLFFSALQVAHLLQDAQIELVYVGAGLTLPDIHDV
DRVNHNVNNWVIAKTAEVDAVKLEHAAHITGKFYQLNNDAAYTLTSQASATASEFCKVTY
TSGSTGMPKGVCLGQDTLMRIVKSLAEALADTLTDDAANPLDITDITSNFGHLSVLPFAT
LLENVAGVYVSLYMGRTLVIGKIGQFGLLSNQAFDAKRLITTVQTHRIASVILLPQMLKA
ICEYLAANESRHAHTSASSNHAHNDYAASNYANSNYIANVALPSLRFMAVGGGKVSPTLL
QEAKALNLPVYEGYGLSECGSVVSLNTPKAKREGSVGKPMPHASVSIAASGEVMVKGNAM
QGYLNHDNTSEDMNNKDNGVIATGDIGYVDNDGYLYITGRRKNVLISSFGRNISPEWVEA
QLLTQSIIYQAAVLGDGEPSLSAVIVANPNEVATNSSDLQLAIKQAIEIVNQALPDYARI
KHWHLEKRSFSTDNGLLTDNGKLRRPRIFTTYKSALGL
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atggggacattactatcaacaaaaccccttggtggttgccatcaatgtggcagacgccaa
aagagtatgcgcgcctcattatcgctataccgagatgttagagatggctgttaccgcaga
tctccctctccacaaaataaccacttaactgatagaactgtaaaaccacaaagtagtgag
gacgaaatgacaccaatctataccgcaatatgtgaacacgctcgcaaggcacctaagcag
gtagcaatcaaaactatagagggcgagcataccgttagcctcacttatgatgagcttcag
cgcacactggccttgcttcatcagacattgcatacatggcaaggcaagcgtgtggccttg
tatgcgcataatgagatagattgggtcatacttgatttggcactaagtaccattggtgct
gtcgtcgtgcctatacccttattttttagtgccttgcaagtggctcacttactccaagat
gcgcagatcgagctggtatacgttggcgcaggtttgacactgcccgacatacatgacgta
gatcgtgtgaatcacaatgtgaataattgggttattgctaagacagcagaagtagacgcc
gtaaagcttgagcacgccgctcatatcacaggcaagttttatcaactgaacaacgatgcg
gcttatactctgacctctcaagcttcagctactgccagcgagttttgtaaagtcacctat
acctctggcagcacaggtatgccaaaaggggtttgcttgggacaagataccttgatgcgt
attgtcaagtctctagcagaagcactcgctgacactttgacagatgacgctgccaaccct
ctagacatcactgatatcacaagtaattttggtcatttaagcgtgttaccttttgccact
ttgttagaaaatgtggccggcgtctacgtgagcttatacatgggacgtaccttagtcatt
ggcaagattggtcaatttggcttgctatccaatcaagcatttgatgccaagcgactcatc
acaaccgtgcaaacgcatcgcatcgccagcgttatcttgttaccgcaaatgctcaaagcc
atttgcgagtatctagcagccaacgaaagtcgtcacgctcatacgagcgcttccagtaac
catgctcataatgattatgctgctagtaactatgctaatagcaactatatagccaatgtc
gctttgccctccttacggtttatggcagtcggtggcggcaaagtgtctcctaccctccta
caagaggccaaagcgctaaacctgcctgtctatgagggctatggcttgtctgaatgcggc
tctgtggtcagtctcaatacacccaaagcaaagcgcgaaggcagtgtgggcaaacctatg
ccccatgcctcagtcagcatcgcagctagcggcgaagttatggtaaaaggcaatgctatg
caaggctacctaaaccatgacaataccagcgaagatatgaataacaaagacaatggcgtt
attgccacaggtgacattggttatgtagataacgatggttatttatatattacgggtcga
cgaaaaaacgtactgatcagtagttttgggcgcaatatctcacctgaatgggtagaagca
cagctcttaacacagtcaatcatctatcaagcggcggtgctgggagatggggagccaagt
ttatctgctgtaatagtcgccaaccctaacgaggtagcgaccaatagtagcgacctacaa
ttggctatcaaacaagcgatagaaattgttaatcaagccttacccgactatgcccgtatc
aaacattggcatttagaaaaacggtcatttagcactgacaatggattattgactgataac
ggcaaactgcgacgaccacgaattttcaccacttataagtcggcattgggcttgtga
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