Psychrobacter sp. PAMC27889: E5677_09190
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Entry
E5677_09190 CDS
T06076
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
psyp
Psychrobacter sp. PAMC27889
Pathway
psyp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
psyp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
E5677_09190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psyp03400
]
E5677_09190
Enzymes [BR:
psyp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
E5677_09190
DNA repair and recombination proteins [BR:
psyp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
E5677_09190
Prokaryotic type
E5677_09190
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QCB31154
LinkDB
All DBs
Position
complement(2229393..2230130)
Genome browser
AA seq
245 aa
AA seq
DB search
MELFDEPKTKTAEQKQAILDNVRLPEDWKKALAEELTSDNMDNLRAFLKSAYQSNESIYP
PAPLIFNAFNLTPLSQVKVVILGQDPYHGPGQAMGLSFSVPKAIPKPPSLNNLLKEMADD
IGIRPSNHGDLTYWAEQGVLLLNSSLTVKESVPNSHQNQGWEQFTDAVIDVINEQTEHTV
FILWGSKAQKKGKYINTDKHLILTAVHPSPLAANRGGFFGTKPFSKTNDYLKQYGQTPID
WQLPQ
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atggaactgtttgatgagccgaagacaaaaacagccgaacaaaagcaagccattttagac
aatgtgcgtttgccagaagactggaaaaaggcattagcagaagaactcacgtctgataat
atggataatttacgagcctttttaaagagtgcctatcaatcaaacgaaagtatttaccca
ccagctcctttgatatttaatgcttttaatttgacacctttgtcacaagtaaaagtcgtg
attttggggcaagatccttatcatggtccaggtcaagcaatggggttatctttttcggta
cctaaagccataccaaagccaccttcactgaataacttattaaaagagatggcagatgat
attggtattcgtccctcgaatcacggggatttgacctattgggcggagcaaggtgtgctg
cttttgaatagctcattgactgtgaaagaaagtgtgccgaatagccaccaaaatcagggt
tgggagcagtttacagatgccgttattgacgtgattaatgagcaaaccgaacacactgtc
tttatattatggggtagtaaagctcaaaaaaagggcaaatatattaacacagacaaacac
ctgattttaacggctgtccacccttcgccccttgctgcgaatcgtgggggattttttgga
actaagccattttctaagaccaatgattatttaaaacagtatggtcaaacaccaatcgat
tggcagttaccacagtaa
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