Psychrobacter sp. PAMC27889: E5677_10280
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Entry
E5677_10280 CDS
T06076
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
psyp
Psychrobacter sp. PAMC27889
Pathway
psyp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psyp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E5677_10280 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psyp03019
]
E5677_10280 (groL)
03110 Chaperones and folding catalysts [BR:
psyp03110
]
E5677_10280 (groL)
03029 Mitochondrial biogenesis [BR:
psyp03029
]
E5677_10280 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psyp04147
]
E5677_10280 (groL)
Enzymes [BR:
psyp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
E5677_10280 (groL)
Messenger RNA biogenesis [BR:
psyp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
E5677_10280 (groL)
Chaperones and folding catalysts [BR:
psyp03110
]
Heat shock proteins
HSP60 / Chaperonin
E5677_10280 (groL)
Mitochondrial biogenesis [BR:
psyp03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
E5677_10280 (groL)
Exosome [BR:
psyp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
E5677_10280 (groL)
Exosomal proteins of other body fluids (saliva and urine)
E5677_10280 (groL)
Exosomal proteins of breast cancer cells
E5677_10280 (groL)
Exosomal proteins of colorectal cancer cells
E5677_10280 (groL)
Exosomal proteins of bladder cancer cells
E5677_10280 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
QCB31340
LinkDB
All DBs
Position
complement(2495839..2497488)
Genome browser
AA seq
549 aa
AA seq
DB search
MAKDVKFGIDARKQMMDGVNVLANAVRVTLGPKGRNVVIDKSFGAPTITKDGVSVAKEIE
LENKFENMGAQLVREVASRTNDVAGDGTTTATVLAQSILQEGMKSVAAGMNPMDLKRGID
KAVRAAVKEIHNLSTPADDEKAIAQVGSISANSDTKIGELISQAMQKVGKQGVITVEEGS
SFEDTLEVVEGMQFDRGYISPYFANKQDSLTAEFENPYILLVDKKISNIREIVPLLEQVM
QQSKPLLIIAEDVENEALATLVVNNMRGGLKTCAVKAPGFGDRRKAMLEDIATLTGGTVI
SEEIGLSLETATLEQLGTAKKVTVGKENTVIVDGAGNKADIENRVESINRQIAESTSDYD
KEKLQERVAKLAGGVAVIKVGAATETEMKEKKDRVDDALHATRAAVEEGVVPGGGVALVR
AMNALSELKGDNDDQDAGINILRRAMEAPLRQIVTNAGEEASVVVNEVKNGTGNYGYNAA
SGEYGDMLEMGILDPAKVSRSALENAASVAGLMLTTEAMITDLPEKDDGMAGMGGAGGMG
GMGGMGGMM
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagacgtaaaattcggcattgatgcccgtaaacaaatgatggacggcgtaaac
gtcctagcaaacgcagtacgtgttactctaggtcctaaaggccgaaacgtggttatcgat
aaatcatttggcgcaccaaccatcactaaagacggtgtctcggttgccaaagaaatcgag
cttgaaaacaaattcgaaaacatgggcgcgcagctcgttcgtgaagtcgctagccgtaca
aatgatgtcgctggtgatggtacgaccactgcaacagtattggctcagtcaatcttgcaa
gaaggtatgaagtcagtcgctgctggcatgaacccaatggatcttaagcgcggtatcgac
aaagccgttcgcgcagccgttaaagaaatccataacttatcaacccctgctgatgacgaa
aaagccattgcgcaagtaggttctatctctgctaactcagacaccaaaatcggtgagttg
atttcgcaggcgatgcaaaaagttggtaagcaaggtgttattacggttgaagaaggttca
agctttgaagataccctagaagttgtcgaaggtatgcagtttgaccgtggttatatcagc
ccgtactttgcaaacaaacaagacagcctaactgctgaatttgaaaacccatatatccta
ttggttgacaaaaaaatcagcaacattcgtgagatcgtgccattacttgaacaagtcatg
cagcagagcaaaccattgcttatcattgctgaagacgtagaaaacgaagcgttggcaacc
ctagttgtgaacaacatgcgtggcggtttgaaaacttgtgctgttaaagcaccaggtttt
ggcgatcgtcgtaaagccatgttagaagacatcgcaacgctaactggcggcactgtaatc
tctgaagagattggtctaagcttagagactgcaacgcttgagcaattgggtacagctaaa
aaagtaaccgttggtaaagagaacactgtgatcgttgatggcgctggtaacaaagctgac
atcgaaaaccgtgttgaatctatcaaccgtcagatcgcagagtctacttctgactacgat
aaagaaaagctacaagagcgtgttgctaagttggcaggcggcgtagcagttatcaaagtt
ggtgcagccactgaaactgaaatgaaagagaagaaagaccgtgttgacgatgcgctacat
gccactcgtgcagcggttgaagaaggcgttgtacctggcggcggtgttgcattggttcgt
gccatgaatgcattgtctgaactaaaaggcgacaacgatgaccaagatgctggtatcaac
atcctacgtcgtgccatggaagccccattacgtcaaatcgtaactaacgctggcgaagaa
gcatcagtcgtagtgaatgaagtgaaaaatggtacgggtaactatggttacaatgcggcc
tctggtgaatacggcgatatgcttgagatgggtatccttgatccagcaaaagtatctcgc
tcagcactagagaacgctgcctctgttgctggtctcatgctaaccactgaagccatgatt
actgacctaccagagaaagatgatggtatggctggcatgggcggtgctggtggaatgggc
ggtatgggtggaatgggcggcatgatgtaa
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