Psychrobacter sp. PAMC27889: E5677_11680
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Entry
E5677_11680 CDS
T06076
Name
(GenBank) OmpA family protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
psyp
Psychrobacter sp. PAMC27889
Brite
KEGG Orthology (KO) [BR:
psyp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psyp02000
]
E5677_11680
Transporters [BR:
psyp02000
]
Other transporters
Pores ion channels [TC:
1
]
E5677_11680
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
Motif
Other DBs
NCBI-ProteinID:
QCB31597
LinkDB
All DBs
Position
complement(2820857..2822473)
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AA seq
538 aa
AA seq
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MDIINHLTRTVSPAVLGDDHSPAKQNLLEQFYAIFAARLADANTYNRFANENIGRDDQQF
YDRVWTEDAHRDQIDRELATKHDVDQTAARGLVAMAAPLAFHEIKSLAGNTPVPQFLNDN
LDSYQHHIPAWASTVLPAGMLAATPAVAGEHISDTVSTAPLQREEEQKGSFLKALLPIIG
LIILGALAWALLRGCQENPEPVATPAVTEQQAADGDEQVAVAADIEPASLSIATGENNEL
YACRMNVGNETLQTNVMNALTSAFGDEANKCRADVDDNFAADMPAAAQLATILPIVKNVP
NASMIIKGDNITVNAPDATALEKLVSDLQAAAPAMTVQAEGPLDLQGEIDDSLAAADAAM
MNLGENPDPRDVARALSIQVINFEVDEAVIPDVNKAFLDRAAKIMAEVPDMNLVIIGHTD
SQASDAYNMELSRERADSVKAYLVSQGIDESKLSTKGMGETDPIADNSTEQGRFRNRRIE
FMVNDQDVNANEAMATGSAALGTNNSMDPDMNPLDNNNDDLLPDGDDATQGTALDPTN
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggatattatcaatcatctgacaagaacggtaagcccagccgtattaggagacgatcat
agtcccgctaagcaaaatctgcttgaacaattttatgcgatttttgcagcccgtcttgct
gacgcaaacacgtataatcgctttgctaatgaaaacatcgggcgtgatgaccaacaattt
tacgatcgcgtttggacagaggatgctcaccgtgaccagattgatcgcgaattagcgacc
aaacacgatgtcgatcagacggccgctcgtggtttagtggcaatggcagcaccacttgct
tttcatgaaatcaaaagcttagcaggcaatacgccagtaccgcaatttttaaatgacaat
cttgacagttatcagcatcatataccggcttgggcgagcacggttctgccagcgggtatg
ttagccgccacaccagcagttgctggcgagcatatttctgataccgtgagcacagcgcct
ttgcagcgcgaagaagagcaaaagggcagcttcttaaaggctttattaccaattattggt
ttgattattttaggggcgctagcgtgggcactccttcgtggttgtcaagagaaccctgag
cctgtggcaacgcctgctgtgaccgagcagcaagcagctgacggtgatgagcaagtagcg
gtggcagcagatattgaacctgcttcattaagcattgccacaggtgaaaacaatgaattg
tacgcttgccgcatgaatgtgggcaacgagacattgcagaccaacgttatgaatgcgttg
accagtgcatttggtgatgaagccaataaatgccgtgctgatgtagacgataactttgca
gcggatatgccagcagcagcacagcttgctactattttgcctatcgtcaaaaacgtacca
aacgctagcatgattatcaaaggcgataacatcaccgtcaatgcgccagatgccaccgct
ctagaaaaactagtatctgatctacaagcagccgcgccagcaatgaccgtacaagctgaa
ggtccgttagatttgcaaggtgagattgatgatagcttggctgcggctgatgcagcgatg
atgaatttgggcgaaaacccagatcctcgtgatgtggctcgtgcattgagcatacaggtc
attaattttgaagtagatgaagccgttatccctgatgtgaataaagcgtttcttgaccgt
gctgccaaaatcatggcagaagtgccagatatgaacttggtgattattggtcatacagac
agtcaagcgtcagatgcttataacatggaattatcacgtgagcgtgctgattcagtcaaa
gcatacttagtctctcaaggcattgatgaaagtaaattgtctacgaaaggtatgggtgag
accgatcctatcgctgacaactcgactgaacaagggcgtttccgcaatcgccgtattgag
tttatggtaaatgatcaagatgtgaatgccaatgaagccatggctactggcagcgctgcg
ctgggtacaaataattcaatggaccctgacatgaacccgcttgataacaataatgatgat
ctgctaccagatggtgatgacgccacccaaggtacagcgttagatccaaccaactaa
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