Psychrobacter sp. PAMC27889: E5677_12190
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Entry
E5677_12190 CDS
T06076
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
psyp
Psychrobacter sp. PAMC27889
Pathway
psyp00300
Lysine biosynthesis
psyp00470
D-Amino acid metabolism
psyp01100
Metabolic pathways
psyp01110
Biosynthesis of secondary metabolites
psyp01120
Microbial metabolism in diverse environments
psyp01230
Biosynthesis of amino acids
Module
psyp_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
psyp00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
E5677_12190 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
E5677_12190 (lysA)
Enzymes [BR:
psyp01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
E5677_12190 (lysA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QCB31691
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All DBs
Position
complement(2939408..2940760)
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AA seq
450 aa
AA seq
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MSHSELPTGESVTTQTEQGLYVDPKALTNHLPALQYRDEALYMEQVSIESIAKQYGTPCY
VYSKQAILDVYQAYTDSFASLDHQICYAVKANSNLAVLSVLAQAGAGFDIVSRGELMRVV
AAGAQASRLVFSGVGKTYGDIEYALTQGIGCFNVESISELTLINEVAKTLDKPAPISLRV
NPNVDAKTHPYISTGLKDNKFGITHEDALAVYQQAAAMSHIDIVGIDCHIGSQLTEVEPF
VAALDKVIELIHSLREHGIELRHIDLGGGLGVRYIDETPVSIEEFAAALLPKLSELGLTV
FFEPGRSIVANAGVLLTQVDVLKPTEHKNFAIVDAAMNDLIRPALYQAEMAVIPNVLPDA
GLDTNDTKAWDIVGAICETGDFLAKDRLLSLAEGDILAITGAGAYGFTMSSNYNSRPRAS
EVMVSEDRHQLIRKRETIESLYADEVLWQD
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgagtcattctgagttacctactggcgaatctgtcactacccaaacagagcaaggattg
tatgtcgatcccaaggctttaaccaatcacttgccagccttgcagtatcgtgatgaggcg
ctgtatatggagcaagtcagtattgagagcattgccaaacagtatggcacgccatgctat
gtctactcaaaacaggccatattggatgtttatcaagcttataccgacagctttgccagt
ctagaccatcagatatgctatgccgtcaaggccaactccaatctggcagtgctgagcgta
ttggcacaagcaggcgcaggctttgacatcgtctcacgtggtgagctaatgcgtgtggta
gcggctggagctcaggcgtcacgcctggtattttcaggcgtgggaaaaacttatggcgat
atcgagtatgcgctgacccaaggcattggctgcttcaatgttgagtctatcagtgagctg
accctcatcaatgaggtggcaaagacacttgataagcctgcaccaatctcattacgcgtc
aatccaaacgtcgatgctaaaactcacccttatatctcgactggtctaaaagacaacaaa
ttcggtatcacgcacgaagatgcgcttgcagtttatcaacaggcagcagcaatgtctcat
atcgatattgtcggtatcgattgccacattggctcacagttaacggaagttgagccattt
gttgccgctttggacaaagtcattgagttgatacatagcctacgggagcatggtattgag
ctgcgtcatattgatttgggcggtggcttgggcgtgcgttatattgatgaaacccctgtg
tctattgaagaattcgcagcagcattactgcccaaactgagtgagcttggtttaacggtg
ttctttgagccgggtcgtagtatcgttgccaatgctggcgtgctcttaacccaagtcgat
gtgctcaagccaactgagcataagaatttcgctattgtcgatgcagcgatgaatgatttg
attcgcccagcgttatatcaagcagaaatggcagtcattccaaacgtattgcctgacgct
ggccttgataccaatgacacgaaagcatgggatattgtcggggctatttgtgaaacgggc
gattttttggccaaagaccgtctattatccctagcggaaggggatatcttagcaattacg
ggtgcgggtgcttatggatttaccatgagcagcaattacaactcgcgcccacgtgcaagc
gaggtgatggtgtcagaggatcgtcatcaactgatccgcaaacgtgagacgattgaatcc
ttgtacgctgatgaagttttgtggcaagactaa
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