Psychrobacter sp. PAMC27889: E5677_13320
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Entry
E5677_13320 CDS
T06076
Symbol
oppF
Name
(GenBank) murein tripeptide/oligopeptide ABC transporter ATP binding protein OppF
KO
K10823
oligopeptide transport system ATP-binding protein
Organism
psyp
Psychrobacter sp. PAMC27889
Pathway
psyp01501
beta-Lactam resistance
psyp02010
ABC transporters
psyp02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
psyp00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
E5677_13320 (oppF)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
E5677_13320 (oppF)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
E5677_13320 (oppF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psyp02000
]
E5677_13320 (oppF)
Transporters [BR:
psyp02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
E5677_13320 (oppF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_22
SMC_N
AAA_21
AAA_13
PRK
RsgA_GTPase
NACHT
AAA
AAA_5
ATP-synt_ab
AAA_29
nSTAND1
NB-ARC
AAA_16
DUF87
NPHP3_N
RNA_helicase
DUF5906
Motif
Other DBs
NCBI-ProteinID:
QCB32153
LinkDB
All DBs
Position
complement(3204353..3205381)
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AA seq
342 aa
AA seq
DB search
MTQITNSSASQPKTPLLKVRDVHTTFNIKQKGTYFWQKPATLKAVNGVSFEIFAGETLGV
VGESGCGKSTLARTIVGLIEANSGSILFNEEELVGASKKTMRMKRKDIQMIFQDPLASLN
PRMTVGDIIAEPLRTYYPKMKKGDVQSEVREIMKKVGLLPNQINRYPHEFSGGQCQRIGI
ARALILKPRIIICDEPVSALDVSIQAQVINLLQDIQEEMGLALIFIAHDLSVIKHIADRV
LVMYLGNAVELGVNKAVYGNPTHPYTQALMSAVPLPDPIAERNKTIQLLEGDLPSPINPP
SGCAFRTRCPLADEECAQIKPVLEGNINHRVACLKNKVEVIS
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgacacagattactaatagcagcgcaagccagcctaaaacaccgttactcaaagtacgg
gatgtccataccacgtttaatatcaaacaaaaaggcacttacttttggcaaaagcctgcg
acgttaaaagccgtcaatggtgtctcgtttgagatatttgctggtgaaaccttgggcgtg
gtaggcgagtcaggctgcggcaaatcgacccttgctcgtactatcgtgggtttgatcgaa
gccaactctggtagcatcttgttcaatgaagaagagctcgtcggcgcgtccaaaaaaacc
atgagaatgaagcgcaaagacattcaaatgatttttcaagatccgctcgcctcattgaat
ccgcgcatgacagtgggcgatatcattgccgaaccgctacgtacttattatcccaaaatg
aaaaaaggtgacgtacaaagcgaagtacgtgagattatgaaaaaggtgggactactgccc
aatcagatcaaccgatatccgcatgagttctcaggtggacagtgtcagcgcattggcatt
gcccgcgctttaatcttaaagcccagaattatcatctgtgatgagccagtctcggcgctt
gatgtttctattcaagcgcaggtcatcaatttattgcaagacatccaagaagagatggga
cttgcgcttatctttattgcccatgatttgtcggtgattaagcatattgctgatcgagtg
ctggtcatgtatttgggcaacgccgtcgagcttggagtaaataaagcggtgtatggtaat
ccgacccatccttatacccaagcattgatgtcggcggtaccgctacctgatcctattgct
gagcgcaataaaaccattcagttattggaaggcgatttgccaagtccgattaatccgccc
tcaggctgcgcgtttcggacgcgctgtccactagcggatgaggagtgtgctcaaattaaa
ccggtgctggaagggaatataaaccaccgagtggcttgtctaaaaaataaagtcgaggtg
atatcgtaa
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