Pseudomonas sp. Y39-6: HXW90_00165
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Entry
HXW90_00165 CDS
T11426
Symbol
choX
Name
(GenBank) choline ABC transporter substrate-binding protein
KO
K02002
glycine betaine/proline transport system substrate-binding protein
Organism
psyq Pseudomonas sp. Y39-6
Pathway
psyq02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
psyq00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
HXW90_00165 (choX)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psyq02000
]
HXW90_00165 (choX)
Transporters [BR:
psyq02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Glycine betaine/proline transporter
HXW90_00165 (choX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OpuAC
3keto-disac_hyd
Motif
Other DBs
NCBI-ProteinID:
QPO18010
LinkDB
All DBs
Position
complement(37089..38012)
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AA seq
307 aa
AA seq
DB search
MQKLTVVLGVMGMAALSSATVYADAGCETVRMADPGWSDIAATNAVAGFLLTGMGYKPKV
DTLAVPITFGGLKDGQVDVFLGNWMPAQQGFYDKFVANGDVVQLAKNLVGTEFTLAVPDY
VWDAGVHDFTDLNSFADKFDKKIYGIGSGAPANLSLQEIIKKNDFDLGQWKLIESSEQAM
LAEVSRAVKKQRFITFLGWTPHPMNVQLKMHYLKGGEKYFGDTGSVYTLTRKGYAQACPN
VGKLLTNLSFTQAMENSIMAAVVNNKVSNADAAKAWIKANPAVLEQWLDGVKTVDGQDAL
AAVKAKL
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaattgactgtggtgctgggcgtaatgggcatggcggcgttgagcagcgccacc
gtgtacgcagacgccggttgtgagacggtgaggatggccgatcctggctggagcgatatt
gccgccaccaatgccgtcgccggttttctgctgacgggcatgggttacaagcccaaggtc
gacaccctggcggtgccgatcaccttcggcgggctcaaggacggccaggtggatgtgttc
ctgggtaactggatgccggcgcagcaaggtttctacgacaaattcgtggccaacggcgat
gtggtgcagttggcgaaaaacctcgtcggcaccgaattcaccctggctgtgccggactat
gtgtgggacgccggggtgcatgactttaccgacctcaactcattcgccgacaagttcgac
aagaagatctacggcatcggctccggcgcgccagcgaacctctcgctgcaggagatcatc
aagaagaacgacttcgacctgggccaatggaagctgatcgagtccagcgaacaggcgatg
ctcgccgaagtctcacgggcggtgaagaaacagcgcttcatcaccttcctcggctggacc
ccgcacccgatgaacgtgcagttgaaaatgcattacctcaagggcggcgagaagtacttc
ggcgacaccggcagcgtgtataccctgacgcgcaagggttatgcacaagcctgcccgaac
gtaggaaaactgctgaccaacctgagtttcacccaggcgatggagaacagcatcatggcc
gcggtggtcaacaacaaggtcagcaatgcggatgcggcgaaggcgtggatcaaggccaac
ccggcggtactggagcagtggctcgacggcgtgaaaaccgtggacggccaggacgcgttg
gccgccgtaaaagccaagctctaa
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