Pseudomonas sp. Y39-6: HXW90_03380
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Entry
HXW90_03380 CDS
T11426
Symbol
ddlA
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
psyq Pseudomonas sp. Y39-6
Pathway
psyq00470
D-Amino acid metabolism
psyq00550
Peptidoglycan biosynthesis
psyq01100
Metabolic pathways
psyq01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
psyq00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HXW90_03380 (ddlA)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HXW90_03380 (ddlA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
HXW90_03380 (ddlA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
psyq01011
]
HXW90_03380 (ddlA)
Enzymes [BR:
psyq01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
HXW90_03380 (ddlA)
Peptidoglycan biosynthesis and degradation proteins [BR:
psyq01011
]
Precursor biosynthesis
Amino acid ligase
HXW90_03380 (ddlA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
ATP-grasp_4
CPSase_L_D2
RimK
GARS_A
CsmB
Motif
Other DBs
NCBI-ProteinID:
QPO18613
LinkDB
All DBs
Position
788589..789683
Genome browser
AA seq
364 aa
AA seq
DB search
MSKVRVGIIFGGRSAEHEVSLQSARNIVDALDRSRFEPVLIGIDKAGHWHLNDTSNFLIN
QENPALIALNQSNRELAVVPGKASQQVVETAGSGLLAHIDVIFPIVHGTLGEDGCLQGLL
RMADLPFVGSDVLGSAVCMDKDISKRLLRDAGIAVTPFITLNRNNAARTSFDMAVGKLGL
PMFVKPANQGSSVGVSKVNDEAEYHAAVELALGFDEKVLVESAVHGREIECAVLGNEHPI
ASGCGEIVVSSGFYSYDSKYIDDQAAQVVVPADISVQASERIRRLAVEAFEVLGCAGLAR
VDVFLTEDGEVLINEINSLPGFTRISMYPKLWQAAGMSYSELVSRLIELALERHAGRKGL
KISR
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaggtgcgcgtagggattatttttggtggccgttcggccgagcacgaagtctcg
ctgcaatcggcgcgcaatattgtcgatgccctcgaccgctcgcgcttcgagccggtgctg
atcggcatcgacaaggccggtcactggcaccttaacgacacctcgaacttcctgatcaac
caggaaaacccggcgctgatcgccctcaaccagtccaaccgcgaactggcggtggtgccg
ggcaaggccagccagcaagtggtggaaaccgccggcagcggcctgctcgcgcatatcgat
gtgatcttccccatcgtccacggcaccctcggcgaggacggttgcctgcaaggcctgctg
cgcatggccgacctgcctttcgtcggctccgacgtgctcggctcggcggtgtgcatggac
aaggacatcagcaaacgcttgctgcgcgacgccggcattgccgtcacgccgtttatcacc
ctcaaccgcaacaacgcggcgcgcacgtcgttcgacatggcggtgggcaagctcggcctg
ccgatgttcgtcaaacccgccaaccaaggctcttcggtgggcgtgagcaaagtgaacgac
gaggccgaataccacgccgccgtcgaactggccctgggttttgacgagaaagtgctggtg
gagtccgccgtccacggccgcgaaatcgaatgcgccgtgctgggcaacgaacatcccatc
gccagcggttgcggcgagatcgtggtgagcagcggcttctattcctacgacagcaagtac
atcgacgaccaggcggcccaagtggtagtgccggccgatatcagcgtgcaagccagcgag
cggattcgccgcctggccgtcgaagcgttcgaggtgttggggtgcgcagggttggcgcgg
gtcgatgtgttcctcaccgaggacggcgaagtgctgatcaacgaaatcaactcgttgccg
ggttttacccggatcagcatgtaccccaagctgtggcaggcggcggggatgagctacagc
gagttggtcagccgcttgattgaactggcgttggagcggcatgcggggcgcaaggggttg
aagatcagccgatag
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