Pseudomonas sp. Y39-6: HXW90_04675
Help
Entry
HXW90_04675 CDS
T11426
Name
(GenBank) type III PLP-dependent enzyme
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
psyq Pseudomonas sp. Y39-6
Pathway
psyq00330
Arginine and proline metabolism
psyq00480
Glutathione metabolism
psyq01100
Metabolic pathways
psyq01110
Biosynthesis of secondary metabolites
psyq04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
psyq00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
HXW90_04675
09106 Metabolism of other amino acids
00480 Glutathione metabolism
HXW90_04675
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
HXW90_04675
Enzymes [BR:
psyq01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
HXW90_04675
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
QPO18851
LinkDB
All DBs
Position
complement(1044134..1045297)
Genome browser
AA seq
387 aa
AA seq
DB search
MSINVEDYFARATFDKMKAFADKQETPFVVIDTAMISQAYDDLRAGFEFAKIYYAVKANP
AVEIIDLLKDKGSSFDIASIYELDKVMARGVSPDRISYGNTIKKSKDIRYFYEKGVRLFS
TDSEADLRNIAKAAPGSKIYVRILTEGSTTADWPLSRKFGCQTDMAMDLLILARDLGLVP
YGLSFHVGSQQRDISVWDAAIAKVKVIFERLKEEDGIHLKLINMGGGFPANYITRTNSLE
TYAEEIIRFLKEDFGDDLPEIILEPGRSLIANAGILVSEVVLVARKSRTAVERWVYTDVG
KFSGLIETMDEAIKFPIWTEKKGEMEEVVIAGPTCDSADIMYENYKYGLPLNLAIGDRLY
WLSTGAYTTSYSAVEFNGFPPLKSYYV
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatcaacgtcgaagattatttcgcgcgcgccacttttgacaaaatgaaggcgttc
gccgacaagcaagaaaccccgttcgtggtgatcgacaccgcgatgatcagccaggcctac
gatgacctgcgcgccggtttcgaattcgccaaaatctattacgcagtcaaggccaacccg
gccgtcgagatcatcgacctgttgaaagacaaggggtcgagcttcgacatcgcctcgatc
tacgagctggacaaggtcatggcccgcggcgtcagccccgaccgtatcagctacggcaac
accatcaagaaatccaaggacatccgctacttctacgagaagggcgtgcgcctgttctcc
accgactccgaagccgacctgcgcaacatcgccaaggccgcgccgggctcgaaaatctat
gtgcgtatcctcaccgaaggctcgaccacggctgactggcctctatcgcgcaaattcggc
tgccagaccgacatggccatggacctgctgatcctcgcccgcgacctgggcctggtgccg
tatggcctctcgttccacgtcggctcgcaacagcgcgacatcagcgtgtgggacgcggcg
atcgccaaggtcaaagtgatcttcgagcgcctgaaggaagaagacggcatccacctcaag
ctgatcaacatgggcggcggcttcccggccaactacatcacccgcaccaacagcctggaa
acctatgccgaggaaatcatccgtttcctcaaggaagacttcggcgacgacctgccggaa
atcatcctggaaccgggccgttcgttgatcgccaacgccggcatcctggtcagcgaagtg
gtgctggtggcacgtaaatcgcgcaccgccgtcgagcgctgggtgtacacggacgtgggc
aagttctccggcctgatcgaaaccatggacgaagccatcaagttcccgatctggaccgag
aagaaaggcgagatggaagaagtggtgatcgccggtcctacctgcgacagcgccgacatc
atgtacgaaaactacaagtacggcctgccgttgaacctggcgatcggtgatcggttgtac
tggttgtcgaccggcgcgtacaccaccagctacagcgcggttgagttcaatggctttccg
ccgttgaagtcgtattacgtgtaa
DBGET
integrated database retrieval system