Pseudomonas sp. Y39-6: HXW90_04905
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Entry
HXW90_04905 CDS
T11426
Symbol
garD
Name
(GenBank) galactarate dehydratase
KO
K01708
galactarate dehydratase [EC:
4.2.1.42
]
Organism
psyq Pseudomonas sp. Y39-6
Pathway
psyq00053
Ascorbate and aldarate metabolism
psyq01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
psyq00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00053 Ascorbate and aldarate metabolism
HXW90_04905 (garD)
Enzymes [BR:
psyq01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.42 galactarate dehydratase
HXW90_04905 (garD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GD_AH_C
GD_AH_second
SAF_GD_AH
Motif
Other DBs
NCBI-ProteinID:
QPO18892
LinkDB
All DBs
Position
1095495..1097048
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AA seq
517 aa
AA seq
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MQLIEHADSPRSIRLHERDNVVIVVNDQGVPAGTEFPDGLVTVDFIPQSHKVTLEDIPEG
GRIIRYGQTIGYALAPIPRGSWVQEDQLRMPTAPPLDSLPLSTEVPAAQAPLEGFTFEGY
RNADGTVGTRNILGITTTVQCVTGVLDHAVKRIKDELLPKYPHVDDVVALTHSYGCGVAI
TATDAYIPIRTVRNLARNPNLGGEALVISLGCEKLQAGQVMHDNDSSVDLSEPWLYRLQD
SSHGFSEMIEQIMALAEVRLKKLDQRRRETVPASELILGMQCGGSDAFSGITANPALGFA
SDLLLRAGATVMFSEVTEVRDAIYLLTSRAQTKEIAEELVREMDWYDRYLAKGEADRSAN
TTPGNKKGGLSNIVEKSLGSIVKSGSSAINGVLGPGERFKGKGLIFCATPASDFVCGTLQ
LAAGMNLHVFTTGRGTPYGLAMAPVVKVSTRTELAQRWPDLIDIDAGRIATGRASIEELG
WELFHFYLDVASGRKQTWAEQHKLHNDITLFNPAPIT
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgcagttgattgaacatgctgactcgccgcgctcgattcgtttgcacgagcgcgacaac
gtggtgatcgtggtcaatgaccagggtgtaccggccgggaccgagttcccggacggcctg
gtgaccgtggatttcattccacaaagccacaaagtgaccctcgaagatatccccgaaggc
ggtcggatcattcgctacggccaaaccatcggttacgccctggcgccgatcccgcgtggc
agttgggtgcaggaagatcaactgcgcatgcccaccgcgccgccgctggacagcttgccg
ctgtccaccgaggtgccagcggcccaggcgccgctggaaggctttaccttcgagggctat
cgcaatgccgacggcaccgtgggcacgcgcaatatcctcggcatcaccaccaccgtgcag
tgcgtcaccggtgtgctggaccatgcggtcaagcgcatcaaggacgagttgctgcccaag
tacccgcatgtcgatgacgtggtggcgttgacccacagctacggctgcggggtggcgatc
accgcgacggatgcgtatatcccgatccgcaccgtgcgcaacctggcacgcaacccgaac
ctggggggcgaagccctggtgatcagcctgggctgcgagaaattgcaggccgggcaggtg
atgcacgacaacgacagttccgtcgacctgagcgaaccgtggctgtatcgcctgcaggat
tccagccacgggtttagcgagatgatcgagcagatcatggccctggccgaggtgcgcctg
aagaagctcgaccagcgccgccgggaaaccgtgccggcgtccgagctgatcctgggcatg
cagtgcggcggcagtgatgcgttttccggcatcaccgccaacccggcgctggggttcgct
tcggacttgttgctgcgagcgggggcgacggtgatgttttccgaagtcactgaggtgcgt
gatgccatctacctgctgacttctcgtgcgcaaaccaaggaaatcgccgaggaactggta
cgggaaatggactggtacgaccgttatctggccaagggcgaggcggatcgcagcgccaat
accacgccggggaacaagaagggcgggttgtcgaacattgtcgagaagtccctgggctcc
atcgtcaagtccggcagcagcgcgatcaacggcgtgctcggcccgggtgaacgcttcaag
ggcaaaggcttgatcttttgcgccacgccggccagcgacttcgtgtgcggcaccttgcaa
ctggcggcggggatgaacctgcatgtgttcaccaccgggcgtggcacgccttacgggctg
gcgatggcgccggtggtgaaggtctcgacccgcacggagctggcgcagcgctggccggac
ctgatcgatatcgacgccgggcgcatcgccaccgggcgtgcgagcattgaggagttgggg
tgggagttgttccacttctacctggatgtagccagcggcaggaagcagacgtgggcggag
cagcacaagctgcataacgacattacgttgttcaacccggcgccgattacctga
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