Pseudomonas sp. Y39-6: HXW90_09730
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Entry
HXW90_09730 CDS
T11426
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
psyq Pseudomonas sp. Y39-6
Pathway
psyq00010
Glycolysis / Gluconeogenesis
psyq00020
Citrate cycle (TCA cycle)
psyq00260
Glycine, serine and threonine metabolism
psyq00280
Valine, leucine and isoleucine degradation
psyq00310
Lysine degradation
psyq00380
Tryptophan metabolism
psyq00620
Pyruvate metabolism
psyq00630
Glyoxylate and dicarboxylate metabolism
psyq00640
Propanoate metabolism
psyq00670
One carbon pool by folate
psyq00785
Lipoic acid metabolism
psyq01100
Metabolic pathways
psyq01110
Biosynthesis of secondary metabolites
psyq01120
Microbial metabolism in diverse environments
psyq01200
Carbon metabolism
psyq01210
2-Oxocarboxylic acid metabolism
psyq01240
Biosynthesis of cofactors
Module
psyq_M00009
Citrate cycle (TCA cycle, Krebs cycle)
psyq_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
psyq_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
psyq_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
psyq_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
psyq00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
HXW90_09730 (lpdA)
00020 Citrate cycle (TCA cycle)
HXW90_09730 (lpdA)
00620 Pyruvate metabolism
HXW90_09730 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
HXW90_09730 (lpdA)
00640 Propanoate metabolism
HXW90_09730 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
HXW90_09730 (lpdA)
00280 Valine, leucine and isoleucine degradation
HXW90_09730 (lpdA)
00310 Lysine degradation
HXW90_09730 (lpdA)
00380 Tryptophan metabolism
HXW90_09730 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
HXW90_09730 (lpdA)
00670 One carbon pool by folate
HXW90_09730 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psyq04147
]
HXW90_09730 (lpdA)
Enzymes [BR:
psyq01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
HXW90_09730 (lpdA)
Exosome [BR:
psyq04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
HXW90_09730 (lpdA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
FAD_binding_2
HI0933_like
FAD_oxidored
GIDA
FAD_binding_3
NAD_binding_8
AlaDh_PNT_C
DAO
3HCDH_N
Thi4
2-Hacid_dh_C
Amino_oxidase
Spike_JR1
Motif
Other DBs
NCBI-ProteinID:
QPO19809
LinkDB
All DBs
Position
2118134..2119570
Genome browser
AA seq
478 aa
AA seq
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MSQKFDVVVIGAGPGGYVAAIKAAQLGLSTACIEKYTDKEGKLALGGTCLNVGCIPSKAL
LDSSWKFHEAQSGFAIHGISHAGVTMDVPAMVGRKANIVKGLTSGVATLFKANGVTSLQG
HGKLLAGKKVEITKPDGSVEIIEAENVILAPGSRPIDIPPAPVDQKVIVDSTGALEFQAV
PKRLGVIGAGVIGLELGSVWSRLGSQVTVLEALDTFLLAADTAVSKEALKTLTKQGLDIK
LGARVTGSKVNGEEVVVTYTDKDGEQTITFDKLIVAVGRRPVTTDLLAADSGVNIDERGF
IHVDDHCATTVPGVYAIGDVVRGMMLAHKASEEGIMVVERIKGHKTQMNYDLVPSVIYTH
PEIAWVGKNEQQLKAEGVEVNVGTFPFAASGRAMAANDTGGFVKVIADAKTDRVLGVHVI
GPGAAELVQQGAIGMEFGTSAEDIGMMVFSHPTLSEALHEAALAVNGHAIHIANKKKR
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcagaaatttgacgttgtagtgattggtgcaggtcctggcggctatgttgccgct
atcaaggccgcacaactgggcctctcgactgcttgcatcgaaaaatacaccgacaaggaa
ggcaaactggcactgggcggtacttgcctgaacgttggttgcattccttccaaggcgctg
ctggacagctcctggaaattccacgaagcgcaaagcggttttgccatccacggcatcagc
cacgctggcgtgaccatggacgtacccgcgatggttggccgtaaagccaacatcgtcaaa
ggcctgacctccggcgttgccaccctgttcaaggccaacggcgtaacttccctgcaaggc
cacggcaagctgctggccggcaagaaagttgaaatcaccaagccggacggttcggtcgaa
atcatcgaagccgaaaacgtgatcctggctccaggttcgcgtccgatcgacattccacca
gcacctgttgaccagaaagtcatcgttgattcgaccggcgccctggaattccaagcagtt
cccaagcgtctgggcgtgatcggcgctggcgtgatcggcctggaactgggttcggtctgg
tcccgcctgggttcccaggtcactgtgctcgaagccctggacacgttcctgctggctgct
gacaccgcagtgtccaaggaagccctgaaaaccctgaccaaacagggtctggacatcaag
ctgggcgctcgcgtgaccggctcgaaggtcaacggcgaagaagtggtcgtgacctacacc
gacaaggatggcgaacagaccatcaccttcgacaagctgatcgtagccgttggtcgccgt
ccagtgaccaccgacctgctggcagccgacagcggcgtgaacatcgacgagcgtggtttc
atccacgttgacgatcactgcgctaccaccgttccaggcgtctacgccattggtgacgtg
gttcgcggcatgatgctggcgcacaaggcttccgaagaaggcatcatggttgtcgagcgc
atcaagggccacaaaacccagatgaactacgacctggtcccatcggttatctacacccac
ccggaaattgcatgggtcggcaagaacgaacagcagttgaaagctgaaggcgttgaagtt
aacgtcggcaccttcccgttcgctgcttctggtcgtgccatggcagccaacgacaccggt
ggttttgtcaaagtcatcgctgatgccaagactgaccgcgtattgggcgtccatgtgatt
ggcccaggcgcagcagaactggtccagcagggcgcaatcggtatggaattcggcaccagt
gccgaggacatcggcatgatggttttctcccatccgaccctgtccgaagcattgcacgaa
gccgcgctggcagtgaatggtcatgccattcacatcgcgaacaagaagaagcgctaa
DBGET
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