KEGG   Pseudomonas sp. Y39-6: HXW90_09730
Entry
HXW90_09730       CDS       T11426                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
psyq  Pseudomonas sp. Y39-6
Pathway
psyq00010  Glycolysis / Gluconeogenesis
psyq00020  Citrate cycle (TCA cycle)
psyq00260  Glycine, serine and threonine metabolism
psyq00280  Valine, leucine and isoleucine degradation
psyq00310  Lysine degradation
psyq00380  Tryptophan metabolism
psyq00620  Pyruvate metabolism
psyq00630  Glyoxylate and dicarboxylate metabolism
psyq00640  Propanoate metabolism
psyq00670  One carbon pool by folate
psyq00785  Lipoic acid metabolism
psyq01100  Metabolic pathways
psyq01110  Biosynthesis of secondary metabolites
psyq01120  Microbial metabolism in diverse environments
psyq01200  Carbon metabolism
psyq01210  2-Oxocarboxylic acid metabolism
psyq01240  Biosynthesis of cofactors
Module
psyq_M00009  Citrate cycle (TCA cycle, Krebs cycle)
psyq_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
psyq_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA
psyq_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
psyq_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:psyq00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    HXW90_09730 (lpdA)
   00020 Citrate cycle (TCA cycle)
    HXW90_09730 (lpdA)
   00620 Pyruvate metabolism
    HXW90_09730 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    HXW90_09730 (lpdA)
   00640 Propanoate metabolism
    HXW90_09730 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    HXW90_09730 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    HXW90_09730 (lpdA)
   00310 Lysine degradation
    HXW90_09730 (lpdA)
   00380 Tryptophan metabolism
    HXW90_09730 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    HXW90_09730 (lpdA)
   00670 One carbon pool by folate
    HXW90_09730 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:psyq04147]
    HXW90_09730 (lpdA)
Enzymes [BR:psyq01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     HXW90_09730 (lpdA)
Exosome [BR:psyq04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   HXW90_09730 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_binding_2 HI0933_like FAD_oxidored GIDA FAD_binding_3 NAD_binding_8 AlaDh_PNT_C DAO 3HCDH_N Thi4 2-Hacid_dh_C Amino_oxidase Spike_JR1
Other DBs
NCBI-ProteinID: QPO19809
LinkDB
Position
2118134..2119570
AA seq 478 aa
MSQKFDVVVIGAGPGGYVAAIKAAQLGLSTACIEKYTDKEGKLALGGTCLNVGCIPSKAL
LDSSWKFHEAQSGFAIHGISHAGVTMDVPAMVGRKANIVKGLTSGVATLFKANGVTSLQG
HGKLLAGKKVEITKPDGSVEIIEAENVILAPGSRPIDIPPAPVDQKVIVDSTGALEFQAV
PKRLGVIGAGVIGLELGSVWSRLGSQVTVLEALDTFLLAADTAVSKEALKTLTKQGLDIK
LGARVTGSKVNGEEVVVTYTDKDGEQTITFDKLIVAVGRRPVTTDLLAADSGVNIDERGF
IHVDDHCATTVPGVYAIGDVVRGMMLAHKASEEGIMVVERIKGHKTQMNYDLVPSVIYTH
PEIAWVGKNEQQLKAEGVEVNVGTFPFAASGRAMAANDTGGFVKVIADAKTDRVLGVHVI
GPGAAELVQQGAIGMEFGTSAEDIGMMVFSHPTLSEALHEAALAVNGHAIHIANKKKR
NT seq 1437 nt   +upstreamnt  +downstreamnt
atgtcgcagaaatttgacgttgtagtgattggtgcaggtcctggcggctatgttgccgct
atcaaggccgcacaactgggcctctcgactgcttgcatcgaaaaatacaccgacaaggaa
ggcaaactggcactgggcggtacttgcctgaacgttggttgcattccttccaaggcgctg
ctggacagctcctggaaattccacgaagcgcaaagcggttttgccatccacggcatcagc
cacgctggcgtgaccatggacgtacccgcgatggttggccgtaaagccaacatcgtcaaa
ggcctgacctccggcgttgccaccctgttcaaggccaacggcgtaacttccctgcaaggc
cacggcaagctgctggccggcaagaaagttgaaatcaccaagccggacggttcggtcgaa
atcatcgaagccgaaaacgtgatcctggctccaggttcgcgtccgatcgacattccacca
gcacctgttgaccagaaagtcatcgttgattcgaccggcgccctggaattccaagcagtt
cccaagcgtctgggcgtgatcggcgctggcgtgatcggcctggaactgggttcggtctgg
tcccgcctgggttcccaggtcactgtgctcgaagccctggacacgttcctgctggctgct
gacaccgcagtgtccaaggaagccctgaaaaccctgaccaaacagggtctggacatcaag
ctgggcgctcgcgtgaccggctcgaaggtcaacggcgaagaagtggtcgtgacctacacc
gacaaggatggcgaacagaccatcaccttcgacaagctgatcgtagccgttggtcgccgt
ccagtgaccaccgacctgctggcagccgacagcggcgtgaacatcgacgagcgtggtttc
atccacgttgacgatcactgcgctaccaccgttccaggcgtctacgccattggtgacgtg
gttcgcggcatgatgctggcgcacaaggcttccgaagaaggcatcatggttgtcgagcgc
atcaagggccacaaaacccagatgaactacgacctggtcccatcggttatctacacccac
ccggaaattgcatgggtcggcaagaacgaacagcagttgaaagctgaaggcgttgaagtt
aacgtcggcaccttcccgttcgctgcttctggtcgtgccatggcagccaacgacaccggt
ggttttgtcaaagtcatcgctgatgccaagactgaccgcgtattgggcgtccatgtgatt
ggcccaggcgcagcagaactggtccagcagggcgcaatcggtatggaattcggcaccagt
gccgaggacatcggcatgatggttttctcccatccgaccctgtccgaagcattgcacgaa
gccgcgctggcagtgaatggtcatgccattcacatcgcgaacaagaagaagcgctaa

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