Pseudomonas sp. Y39-6: HXW90_13320
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Entry
HXW90_13320 CDS
T11426
Symbol
tssH
Name
(GenBank) type VI secretion system ATPase TssH
KO
K11907
type VI secretion system protein VasG
Organism
psyq Pseudomonas sp. Y39-6
Pathway
psyq02025
Biofilm formation - Pseudomonas aeruginosa
psyq03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
psyq00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
HXW90_13320 (tssH)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
HXW90_13320 (tssH)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
psyq02044
]
HXW90_13320 (tssH)
Secretion system [BR:
psyq02044
]
Type VI secretion system
Imp/Vas secretion system core components
HXW90_13320 (tssH)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
AAA_5
ClpB_D2-small
Clp_N
AAA_16
NBD_SMAX1
AAA_22
AAA_25
nSTAND3
NACHT
AAA_7
bpMoxR
Zeta_toxin
IstB_IS21
TniB
Sigma54_activat
AAA_14
AAA_24
nSTAND6
DUF815
Hpr_kinase_C
CxC7
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
QPO20462
LinkDB
All DBs
Position
2932659..2935313
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AA seq
884 aa
AA seq
DB search
MAQNSTRLLRRLNPYCAQALSAAATLCQSRAHAQITVEHWLLKLLGQGEGDLTVIARRYE
WNMETLWYGLLEHIDRLPRSVQSKPQLSAPLQQLIKNAWLRASLDEHNDSLRSVHLLSAL
METPNLLACEAVWPLLSLSEAQLQRLQVLLDQTSEERRAVQTSVIAVPSSELAILPPSVS
KDDALAALLDRFTQDLTAKAAQGKIDPVFGRDDEIRQVIDILSRRRKNNPILVGEPGVGK
TALVEGLALSIAQGKVPDSLKTVSVRTLDLGLLQAGAGVKGEFEQRLKNVIDAVQQCEQP
VLLFIDEAHTLVGAGNQAGGADAANLLKPALARGELRTIAATTWSEYKQYFERDAALERR
FQMVKVEEPDDANACLMLRGLKARYASHHGVHIQDAAVQAAVSLSRRYLTGRQLPDKAVD
LLDTASARVCMSLDCEPQALRRLSALQVALELEGQALEQDQRLGGHSVDERLATIAAQHA
DLQRQHADLEQQYRQELDLAQQLIAARQAQPPQRDTCAQLQRQLSDIQGSQPLLSLDVDA
RSVAQVIADWTGVPLGSLLKDEQANLLLLEQQLQARVIGQAPALSALAQRLRAAKTGLTD
EKAPLGVFLLVGTSGVGKTETALALADSLFGGEKSLITLNFSEYQEAHTVSQLKGSPPGY
VGYGRGGVLTEAVRQRPYSVVLLDEVEKAHRDVLNLFYQVFDRGFMRDGEGREIDFRNTV
ILMTSNLGSDLLHTSVQEHPEIPDSVLHERLRPILREHFQPALLARFQTLIYRPLRADAL
KCIVAIKLAQVAKRLQRHYGLDCRIDDTLNDALVAACLLPDSGARNIDSLLNEQILPVLS
QHLLARRAAQLRTHGVSLGYSEDEGISLHFSDVQDTAQAVALEV
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atggcccagaattccacgcgcttgcttcgtcgtctcaacccttactgcgcccaggcgttg
agtgcagcggccacgctgtgccaaagccgtgcccacgcgcagatcaccgtcgaacactgg
ctactcaagttgctggggcaaggtgaaggcgacctgaccgtgatcgcacgtcgctatgag
tggaatatggagacgttgtggtatggcttgctggagcacatcgatcgtctgccgcgtagc
gtgcagagcaagccgcagctgtcggcgccattgcagcaactgatcaaaaatgcctggttg
cgtgcctcattggacgagcacaacgacagcctgcgttccgtacatctgctgagcgcgttg
atggagacgcccaacctgctggcgtgcgaagccgtatggcctttgctcagtctcagtgag
gcgcagttgcagcggctgcaggtgctgctggaccaaacctccgaagagcgccgcgcggtg
cagacgtcagtgatcgcggtgccttcaagtgaactcgccatactcccgcccagcgtgtcg
aaagacgatgcgttagcggcgctgctggacaggttcacccaggacctgaccgccaaggcc
gcgcaagggaagatcgacccggtgttcggccgcgatgatgaaatccgtcaggtcattgac
atcctcagccgtcggcgcaaaaacaatccgatcctggtgggcgagcctggtgtcggcaaa
acggcgctggtcgaaggcctggcgttgagcattgcccaaggcaaggtgccggacagtctc
aaaacagtcagtgtgcgtacccttgacctgggattgttgcaagccggcgctggcgtcaag
ggcgagttcgaacaacgcctgaaaaacgtgatcgacgccgtacagcagtgcgaacaaccg
gtgctgttgtttatcgatgaggcccataccctggtcggggccggcaaccaggccggcggc
gccgatgcggccaacctgctcaagcccgctctggcccgtggcgagttgcgcaccatcgcc
gcgaccacctggagtgaatacaagcagtatttcgagcgtgatgccgctttggaaagacgc
tttcaaatggtcaaggtcgaggaaccggacgacgcgaacgcttgcctgatgttacgcggg
ctcaaggcgcgctacgccagccatcacggtgtgcatatccaggatgcggcagtgcaggcg
gcggtcagcctgtcgaggcgctacctgacggggcgccagttgccggacaaagccgtcgac
ctgctggacaccgccagcgcccgggtgtgcatgagcctggactgcgaaccgcaggcgttg
cgccgtctgagtgccctgcaagtggccctggaactggagggccaagcgctggagcaggat
cagcggcttggcggccacagcgtggatgagcgtctggcgacgattgccgcgcaacacgcc
gatctgcaacgtcagcacgccgatctggaacagcaataccgccaagaactcgatctggcc
caacaactgattgctgcgcgccaggcgcagccaccgcagcgggatacctgtgcacagttg
caacggcagttgagtgacattcaaggcagccagccactgctgtctttggacgtcgacgca
cgtagcgtggcgcaagtcatcgccgactggaccggcgtgccgctgggcagcttactcaag
gacgagcaggccaatctgctgctgctcgaacagcaattgcaagcgcgcgtgatcggccag
gctccggccttgagtgccttggctcagcgcctgcgtgcggccaaaaccgggctcaccgat
gagaaggcgccgttgggcgtgttcctgctggtcggcaccagcggcgtaggcaagaccgaa
acggcgctggccttggccgacagcctgttcggtggcgaaaaatcactgatcaccctcaac
ttttccgagtaccaggaagcccacacagtcagtcaactcaaaggctcgccacccggctac
gtcggctacggccggggcggtgtattgaccgaagccgtgcgccagcggccctacagcgtt
gtgttgctcgacgaggtggaaaaggcgcatcgcgatgtgcttaacctgttctaccaagtc
ttcgatcgtgggtttatgcgcgatggcgaagggcgcgagatcgacttccgtaacacggtc
attctgatgacctccaacctcggcagcgatctactgcacaccagcgtgcaggaacacccg
gagataccggacagcgtgctgcatgaacgactgcgtccgatcctgcgcgaacactttcag
ccagcgttgctggcgcgctttcaaaccctgatctatcgcccgctgcgagccgacgcactc
aaatgcattgttgcgatcaagctggcccaggtcgccaagcgcctgcagcgtcattacggc
ctggattgccggattgacgacaccctgaacgacgccttggttgctgcctgcctgctaccg
gattcaggtgcacgcaacatcgacagcttgcttaacgagcagatcctgccggtcctcagt
caacacctgttggcgcgtcgagcggcgcaactgcgcacccacggcgtgagcttgggctat
agcgaggatgaagggatcagtctgcatttcagcgatgttcaagacacggcgcaggccgtc
gccctggaggtgtga
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