KEGG   Pseudomonas sp. Y39-6: HXW90_15360
Entry
HXW90_15360       CDS       T11426                                 
Symbol
tssF
Name
(GenBank) type VI secretion system baseplate subunit TssF
  KO
K11896  type VI secretion system protein ImpG
Organism
psyq  Pseudomonas sp. Y39-6
Brite
KEGG Orthology (KO) [BR:psyq00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:psyq02044]
    HXW90_15360 (tssF)
Secretion system [BR:psyq02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   HXW90_15360 (tssF)
SSDB
Motif
Pfam: T6SS_TssF
Other DBs
NCBI-ProteinID: QPO20842
LinkDB
Position
3418463..3420178
AA seq 571 aa
MLNSHYQSELNQLRRLADEFARRNPALAPLLGVDSANDPDVERLLEGVAFLTGMVRQRLD
DEFPEFIQELAQLLYPHYLQPLPCLTLLQFQPRTALQEVTRIEPGCEIASVPVDGQRVRF
SSTAAVDLEPLQLLGSRWDGGAGEERSLVLDFAFTTADPNSWLADSLRFYLGDGLVDGSK
LLRLLQLNLREIRISAQEQPMTVLPASHLRGLGFDASNALLPFPDTAHPAYRCLQEYFAL
PEKFLFIELRGFKQWRARGADGRFSVRLMFENLPDWTPNLSANSFLLGVTPAINLFAQDA
HPLRIDHKQVDYRIQPADHGQRMSMRIHSVLKVSAYSAGGGERLLEPFNTFSQRDTYNLR
IRASSIDAQGYDHYLSLPYSEGKVPGEMTLSIGLLCTNGKLPESLRLGDLNQPTDNTPPR
VEFKSIRGITPCQPPKFDDKLLWRMLSQLNANHFRLADRDYLRGLLALYLPSVGEGAQDA
NQRRIDAIEKVTVSHERRFIRGLPIEGSVVRVECRGDYFLSPGNFYLFGCVLDEFFAGCT
AINSFTAFTLFDSVNHETLKWPAKIGHQRLL
NT seq 1716 nt   +upstreamnt  +downstreamnt
atgctcaacagccattatcaaagtgaactcaaccaactgcggcgtctggccgatgagttt
gcccgccgcaacccggccctggcgccgctgctgggggtggactcggccaatgacccggac
gtcgaacgcttgctcgaaggcgtggcgtttctcaccgggatggttcgccaacggttggac
gacgagtttcccgagttcattcaagagttggcgcagctgctctatccccattacctgcaa
ccgttgccctgcctgacgctgctgcaatttcagccgcgcacggcattgcaggaggttacg
cgtatcgagcccggctgcgaaattgcctcggtaccggtcgatggccagcgcgtacgcttc
agcagcaccgcggcggtcgacctggagccgctgcaactgctcggcagccgctgggacggc
ggcgccggtgaagagcgcagcctggtcctggacttcgcttttaccaccgctgacccgaat
agctggctggccgacagcctgcgtttctatctgggggatggccttgtcgatggctccaag
ttattgcgtctgttgcagctcaacctgcgcgagattcgcatctctgcgcaagagcagccc
atgaccgtattgccggccagccatttgcgtggcctgggattcgatgcgagcaacgccttg
ctgccgtttcccgataccgcgcacccggcctatcggtgcctgcaggaatacttcgcgctg
cccgagaaattcctgtttatcgagcttcgcggcttcaaacagtggcgagccagaggcgca
gacgggcgcttcagcgtgcgcctgatgttcgagaacctgccggactggacaccgaacctg
tcggccaacagctttttgctgggggtgacgccggcgatcaatctgttcgcccaggatgca
cacccgctgcgcatcgaccacaagcaagtcgactatcgcatccagcctgccgaccatggc
cagcgcatgagcatgcggattcattcggtgctcaaggtcagtgcttattccgccggaggc
ggggagcggctgctggaaccgttcaataccttctcgcagcgcgacacgtataacctgcgc
atccgcgcctcgagtatcgatgcccaaggttatgaccactatctgagcctgccctacagc
gaaggcaaagtgccgggcgagatgaccttgtccatcggcttgctctgcaccaatggcaag
ctgccggaaagcctgcgcctgggggatttgaaccagcccaccgacaacacgccgcccagg
gtcgagttcaagagcatccgtggcatcacaccgtgccagccgcccaagttcgacgacaag
ttgctgtggcgcatgctctcgcagctcaatgccaaccacttccgcctggccgatcgcgac
tacctgcgcgggctgctcgcgctgtatctgccgagcgtcggcgaaggggcccaggatgcc
aaccagcggcgcatcgatgccatcgaaaaagtcaccgtcagccacgagcggcgttttatt
cgcgggctgccgatcgaaggcagtgtggtccgggtcgagtgccggggcgactatttcctc
agccccggcaatttctacctgttcggttgtgtgctcgatgaatttttcgccggctgtacg
gccatcaacagctttaccgccttcacgctgttcgacagcgtcaaccacgagaccttgaaa
tggccagcgaagatcgggcaccaacgcctgttgtga

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