Pseudomonas sp. Y39-6: HXW90_15370
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Entry
HXW90_15370 CDS
T11426
Symbol
tssH
Name
(GenBank) type VI secretion system ATPase TssH
KO
K11907
type VI secretion system protein VasG
Organism
psyq Pseudomonas sp. Y39-6
Pathway
psyq02025
Biofilm formation - Pseudomonas aeruginosa
psyq03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
psyq00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
HXW90_15370 (tssH)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
HXW90_15370 (tssH)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
psyq02044
]
HXW90_15370 (tssH)
Secretion system [BR:
psyq02044
]
Type VI secretion system
Imp/Vas secretion system core components
HXW90_15370 (tssH)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
ClpB_D2-small
AAA_5
AAA_16
AAA_22
Clp_N
Sigma54_activat
NBD_SMAX1
AAA_7
TniB
nSTAND3
TIP49
AAA_14
AAA_25
AAA_18
Zeta_toxin
RuvB_N
ResIII
AAA_24
EAP30
Hpr_kinase_C
ABC_tran_CTD
Motif
Other DBs
NCBI-ProteinID:
QPO20844
LinkDB
All DBs
Position
3421150..3423882
Genome browser
AA seq
910 aa
AA seq
DB search
MIQVELKPLFARLNVYSTKALENAAGQTLARAHYEISLEHLLRQLLEDPDADTTRILARF
EIDPMRLRALLDEGLAQLKNGNPGRPVFAGLLTEWIQDAWLIASLVVGSGRIRGGSLLLA
LVSRLGYYSAGTRYGELLKPISTDALTAEFAQLLGGSSEGPLDSLQTGTASASLAGAGGN
TPAAEDNIARFCEDLTAKAAAGRIDPIFGRDDEIRQMIDILARRRKNNPIAVGEPGVGKS
AVVEGLALLISQDEVPDFLKNTRLLSLDLGALEAGASVKGEFENRLRGVIEEIKASTTPV
ILFIDEAHMLIGAGGAAGGSDAANLLKPALARGELRTIAATTWSEYKKYFEKDPALARRF
QLVKLDEPSVKTAVLILRGLKGHYEKVHGVSVRDDAIVAAAELSDRYITGRLLPDKAVDL
LDTASARVRIGLGIKPAELERMERQLSGLAREQSALERDRGNGFPVEDQRLTDIADEQAE
IDERRVALEVRWLAERDAALRVLEARKQLTRQAQDLPVPAEGEVVQVLASLEERQAELDQ
ARETLAALQGDAPLLFTEVSPDAIAQVVSDWTGVPLGKVLRDAAGGVLALADNLKTRIRG
QDTAVEQIAEILKAAQSGLRDPQQPLGVFLLVGPSGVGKTETALAVAEHLFGGEQAMISV
NMSEYQEKHTVSRLVGSPAGYVGFGEGGMLTEAVRKRPYSVVLLDEVEKAHLDVVNIFYQ
VFDKGSLSDGEGRQIDFSNTVVLLTSNLATEEIQNLCVDGRPDPDTLAEKIRPTLSRHFK
PALLARMTIVPFFTLGGAQLAGIVRLKLGRLSERLLASSKVRLTFAEEVADAIAARCTEV
ESGARNIDFILRKSLTPRLSDVLLGAIADQRPLAGLHVAVDARGEWIITTQDIDAIRSLP
EREALLEPLE
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atgattcaggtagaactcaaaccgctgttcgcacggctcaatgtgtacagcaccaaggcc
ctggagaacgcggcgggccagaccctggcgcgcgctcactacgagatttccctggagcac
ctgctgcgccagttgctggaagatccggatgccgatacgacgcgcattctcgcgcgcttc
gagatcgatccgatgcgcttgcgtgcgctgctggatgagggcctggcgcagttgaaaaac
ggcaacccaggacgtccggtgttcgctggcctgctcaccgaatggattcaggacgcctgg
ctgattgcctcgctggtggtcggcagcgggcggatccgtggcggttcgctgctgctggcg
ctggtatcgcgcctgggctactacagcgctggcacgcgttacggcgaactgctcaagccg
atttccaccgatgccctgaccgcagagttcgctcaactgttgggcggctccagcgaaggt
ccgctggacagcctgcagaccggcacggcctctgcttcgttggccggcgccggcggcaat
acgcccgcagccgaagacaatatcgcgcgcttttgcgaagacctgaccgccaaggcagcg
gcggggcgcatcgacccgattttcgggcgcgatgatgagattcgccagatgatcgacatc
ctcgcccggcggcgtaaaaacaaccccatcgcggtgggcgagccaggtgtgggcaagtcc
gccgtggtggagggcctggcgttgttgatcagccaggacgaagtccccgacttcctcaaa
aacacacgtttgctcagcctggatctcggtgcgctggaagcgggcgccagcgtcaagggc
gagttcgaaaaccgcctgcgtggcgtcatcgaagagatcaaggcctccaccacgccggtg
atcctgttcatcgacgaagcgcacatgctgatcggcgccggcggcgcggcgggtggctcg
gatgcggccaacctgctcaaacccgcattggcccgtggcgagttgcgcaccatcgccgcc
acgacctggtcggagtacaagaagtacttcgagaaagacccggccctggcgcgtcgtttc
caactggtcaagctggacgagccgagtgtcaaaaccgcagtgttgatcctgcgcgggctc
aaggggcactacgagaaagtccacggggtcagcgtgcgtgacgacgccatcgtcgccgcc
gccgaattgtccgatcgctacatcaccgggcgcttgctgccggacaaggccgtcgacttg
ctcgacaccgccagcgcccgggtacgcatcggcctgggtatcaagcctgccgagttggag
cgcatggagcggcagttgtccggtctggcgcgtgaacagagcgcgctggagcgcgaccgt
ggcaatggtttccccgtagaagaccagcgcctgacggatatcgccgacgaacaggctgag
attgacgagcgtcgggttgcgctggaagtccgctggctggccgagcgcgacgcggcgctg
cgcgtccttgaagcacgcaagcaactgacccggcaagcacaggatctgccggttccggcc
gaaggcgaggttgtgcaggtactggcctcgctggaggaacgtcaggccgagctggatcag
gcccgtgaaaccctggccgcactgcaaggcgatgcgccgttgctgttcaccgaagtcagc
cccgatgcgattgcccaggtcgtctccgactggactggcgtgccgctgggcaaagtgctg
cgcgatgcggcgggcggcgtattggccctggccgacaacctcaagacgcgcattcgcggt
caggacaccgccgtcgagcagatcgcggaaatcctcaaggccgcgcaatccggcctgcgc
gatccgcaacagccgttgggtgtgttcctgctggtcgggccgtcgggggtcggcaagacc
gaaaccgctctggctgtggccgaacatctgttcggcggcgaacaggcgatgatctcggtg
aacatgagcgagtatcaggagaagcacaccgtcagccgcttggtgggttcgcccgccggc
tatgtcggcttcggcgagggcggcatgttgaccgaggcggtgcgcaagcgtccgtattcg
gtggtgttgctcgatgaagtggaaaaagcccacctggacgtggtgaacattttctatcag
gtcttcgacaagggcagcctgtccgacggcgaagggcggcagatcgatttctccaacacc
gtggtgctgctgaccagcaacctggccaccgaagaaatccagaacctgtgcgtcgacggg
cggcccgacccggacaccctcgcggaaaaaatccgcccgaccctgtcccggcatttcaaa
ccggcgctgctggcgcgcatgaccatcgtgccgttcttcaccctgggtggcgcgcaactg
gcaggtatcgtgcgcctcaagctgggccggctcagcgagcgtctgctggcgtcgtcgaaa
gtccgtctgacgtttgcagaagaggtcgccgacgccatcgccgcgcgctgcacggaagtg
gagagcggggcgcgcaatatcgacttcattttgcgtaagagcctgacaccgcgcctgtct
gacgtcttgctcggggcgattgccgaccagcggcccctggccggcttgcatgtggcggtg
gatgcgcgcggcgagtggatcattaccacgcaagacatcgatgcgatcaggtctttaccc
gagcgtgaagcgctgcttgagcccctagagtga
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