Pseudomonas sp. Y39-6: HXW90_16045
Help
Entry
HXW90_16045 CDS
T11426
Name
(GenBank) AraC family transcriptional regulator
KO
K06599
AraC family transcriptional regulator, chemosensory pili system protein ChpD
Organism
psyq Pseudomonas sp. Y39-6
Brite
KEGG Orthology (KO) [BR:
psyq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psyq03000
]
HXW90_16045
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
psyq02035
]
HXW90_16045
Transcription factors [BR:
psyq03000
]
Prokaryotic type
Helix-turn-helix
AraC family
HXW90_16045
Bacterial motility proteins [BR:
psyq02035
]
Pilus system
Chemosensory pili system proteins
HXW90_16045
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
AraC_binding
AraC_binding_2
Phage_integrase
Cupin_2
Motif
Other DBs
NCBI-ProteinID:
QPO20970
LinkDB
All DBs
Position
3580582..3581373
Genome browser
AA seq
263 aa
AA seq
DB search
MSTLQHAWLGDYEINSVHCSGLTFARHSHDECVIGVNLVGEENVWLDRREFVAGPGAITL
YNPGQIQGGGAAEGAPWQFVSLYVSAEQLAADLGLAHVEFDRSLCFQPDLARRLAAVAKG
ASSGDVLVRELNEDALVVLLGEVVRLSGVRLPGNAAAGKSLIGRAQELLAAQLHQSLPLD
HLGEALGLSKFHLLRTFQKETGLSPRQWAMQLRTRRAKGLLRNGMAAGEVAHQLGFADQS
HLNRHFRAAYGLTPGRYQSVAKR
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccctgcaacacgcctggctgggcgactacgaaatcaacagcgtccactgctcc
ggcctgacctttgcccgccacagccacgacgaatgcgtgatcggcgtgaacctggtgggc
gaagaaaacgtgtggctggaccgccgtgaattcgtggctgggccaggcgccatcaccttg
tacaaccccgggcagattcagggcggcggtgcggcggaaggcgcgccgtggcagtttgtc
agcctgtacgtcagcgccgagcaattggccgccgacctggggttggcgcatgtcgaattc
gatcgatcgttgtgtttccagccggatctggcgcggcgcctggcggctgtggcaaaaggc
gcatcgagcggcgacgttctggtccgcgagctgaacgaagacgccctggttgtgctgctg
ggagaagtggtccgcctcagcggcgtgcgcttgcccggcaacgcggcagccggcaaaagc
ctgatcggccgcgcccaggaattgctcgccgcacagttgcatcaatcgctgcccctggac
cacctcggcgaggcgctggggttgtccaagttccacctgctgcgcacctttcaaaaagag
accgggctcagccctcgccagtgggccatgcaattgcgcacgcgccgcgccaaaggcctg
ttgcgcaatgggatggcggccggcgaggtcgcccatcagctcggttttgccgaccagagc
cacctcaaccggcacttccgcgccgcctatggcctcacgcctggccgctatcagagtgtg
gcgaaacgctga
DBGET
integrated database retrieval system
