Pseudomonas sp. Y39-6: HXW90_16995
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Entry
HXW90_16995 CDS
T11426
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
psyq Pseudomonas sp. Y39-6
Pathway
psyq02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
psyq00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HXW90_16995
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psyq02000
]
HXW90_16995
Transporters [BR:
psyq02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
HXW90_16995
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
AAA_21
TOBE_2
AAA_22
SMC_N
AAA
AAA_16
Rad17
AAA_28
nSTAND_NTPase5
NACHT
AAA_29
AAA_30
AAA_14
ATPase_2
Motif
Other DBs
NCBI-ProteinID:
QPO21143
LinkDB
All DBs
Position
complement(3845559..3846590)
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AA seq
343 aa
AA seq
DB search
MTAITIRLQGCRKAFADGTVAVHDLDLTVEGGETLAILGPSGCGKTTTLRLIAGLERPDV
GQVFFGDQDVTRLPIERRDVGMVFQNYALFPNLDVAGNIVYGLKIRGVSPAERNKRCEEL
LELVGLQHHGKRSIHELSGGQRQRVALARALAPRPKVLLLDEPLAALDAQLRERLRSELN
QLLRGLGITSVFVTHDQGEAMALGDRILVMEHGRVAQLASPRDIYQKPANAFVAGFVGNL
NAFQVIEPSPHGLKVCGGELPWHAAQLPGTVYCRPEHLRVMEHEGHLHGHLLAQFFQGAQ
SRLLVDVGGPQPLLVDSSDNQLYAVGAPIALAIAPHMLFTLNA
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgaccgctatcactatccgcctgcaaggttgccgcaaggcgttcgccgacggcaccgtc
gccgtgcatgacttggacctgaccgtcgaaggcggcgaaaccctggccatcctcggcccg
tccggttgcggcaaaaccacgacgttgcgcttgatcgccggcctggaacgcccggatgtg
ggccaggtgttctttggcgaccaggacgtcacgcgcctgcccatcgagcgccgcgatgtg
ggcatggtgttccagaactatgcgctgtttcccaacctggatgtggccgggaatatcgtc
tatggcctgaagattcgcggcgtgtcgccagcggagcgcaacaagcgctgcgaggaactg
ctggaactggtcggtttgcaacaccacggcaagcgcagcattcatgaactgtcgggtggg
caacgccagcgcgtggccttggcccgtgcgttggcgccgcgccccaaggtgctgttgctg
gacgaacccctggccgccctcgatgcgcaattgcgtgagcgcctgcgcagtgagttgaat
caactgttgcgcggcctcggtatcacctcggtgtttgtcacccacgaccagggcgaagcc
atggccctgggggatcgcatcctggtgatggaacacggccgcgtcgcgcaactggccagc
ccgcgggacatctaccagaagccggccaacgccttcgtcgcaggctttgtcggcaacctg
aatgccttccaggtcattgagccgtcgccccatggtttgaaagtctgcggcggcgaattg
ccgtggcatgcagcgcagttgcccggcaccgtgtattgccgccccgaacacttgcgggtg
atggaacacgaagggcatctgcacggccatctgctggcgcagtttttccagggcgcgcaa
agccgcctgctggtggatgtgggcggcccgcaaccgttgctggtcgacagcagcgacaac
cagctgtacgccgtcggcgcgccgattgccttggccatcgcgccgcacatgttgttcacc
ctgaatgcgtga
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