Pseudomonas sp. Y39-6: HXW90_17245
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Entry
HXW90_17245 CDS
T11426
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
psyq Pseudomonas sp. Y39-6
Brite
KEGG Orthology (KO) [BR:
psyq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psyq03000
]
HXW90_17245
Transcription factors [BR:
psyq03000
]
Prokaryotic type
Helix-turn-helix
Other families
HXW90_17245
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
QPO21191
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Position
3899739..3901607
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AA seq
622 aa
AA seq
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MLAANSKDHVDCVSRVVRNADRLPQAPVPSLIFDSWRRSMEQHHLDPGSLQGPRILSEPL
LKECRERAELFMHIASEEVGQLHHRVRHADYCVMLTDAQGQTIDHRVDTAIRTDCRKAGL
YLGTCWSEAEEGTCGVATVLTSKAAVTVHKRDHFRAAFIGLTCSAAPIFDPQGNLLGVMD
ASALKSPDDRRSQHLVRQMVAQSAQAIENAFFMHSARQHWVLQAHSTPGYVDSQPDLLLA
WDQDGRLHALNSKARQALRRRFGQVPAHIGEVFDLDALRAVTDQSAQQLHWLGEPGALHV
RVSAPRRKPARPAKAVNNQVDPRVEEHLRLALRVKDRNLPVLVQGETGAGKEVFARQLHE
RSARRNGPFVAVNCAAIPENLIESELFGYVAGAFTGASNKGMPGLLLQADGGTLFLDEIG
DMPLALQTRLLRVLAEGEVAPLGAAKTRAVDIQVICASHRDLAVLVSEGRFREDLYFRLG
CARFCLPPLRERSDKLALINRLLEQEAHSGAISVGIGPAALEVLLGYAWPGNVRQLRHVL
AYACAVCDGGTIQLADLPVEVRGEQIEADVEERVSPERQVVLDALIRHRWKPSPTAQALG
ISRATLYRRVNQLGIDMPGKHI
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgctcgccgcgaactccaaagaccatgtcgactgcgtcagtcgcgtggtccgcaatgcc
gatcgcctgccccaggctccggtgccgtcgctgattttcgattcatggcgccgttccatg
gagcaacaccacctcgaccctggctcgctgcaagggccacgcattctcagtgaaccgctg
ctcaaggaatgccgtgagcgcgccgaactgttcatgcacatcgccagcgaagaagtcggc
caactccaccaccgcgtgcgccatgccgactactgcgtgatgctcaccgacgcccagggc
cagaccatcgaccaccgcgtggacacggcgattcgcaccgattgccgcaaggccggcctg
tacctgggcacctgctggtcggaagccgaagaaggcacctgcggcgtggccacggtgctg
accagcaaggctgccgtgacggtgcataagcgcgatcactttcgcgcagcatttatcggg
ctgacctgctccgccgcgccgatcttcgacccccagggcaacctgctaggggtgatggac
gcctcggcgctcaaatccccggatgaccggcgcagccagcatctggtaagacagatggtg
gcgcagagcgcacaagccatcgaaaatgccttcttcatgcacagcgcccgtcagcactgg
gtgctccaggcccacagcacgcccggctatgtcgacagccagcccgacctgctgctggcc
tgggaccaggatgggcgcctgcatgcgttgaacagcaaggcgcgccaggccctgcgtcgg
cgctttggccaggtgccggcgcatatcggcgaggtcttcgacctggatgcgttgcgcgcg
gtcaccgatcaatcggcgcaacagctgcactggctgggcgagcccggcgcattgcatgtg
cgggtcagcgcgccgcggcgtaagccggcgcgtccagcgaaggccgtaaacaatcaggtc
gacccccgggtggaagaacacctgcgcctggccttgcgggtcaaggaccgcaacctgccg
gtgctggtgcagggtgaaaccggcgccggcaaggaagtcttcgcgcgccaactgcatgag
cgcagcgctcgtcgcaacgggcccttcgtggcggtgaactgcgcggcgatcccggaaaac
ctcatcgaaagcgagctgttcggctatgtcgccggggcctttaccggcgcgtcgaacaag
ggcatgcccgggctgttgttgcaggccgatggcggcacgctgttcctcgatgaaatcggc
gatatgccgctggccctgcagacgcgcttgctgcgggtattggccgaaggtgaagtggcg
ccgctgggtgcggcaaaaacccgtgcggtggatatccaggtgatctgcgccagccaccgc
gacctggcggtgctggtcagcgaggggcgctttcgcgaagacctgtactttcgcctgggc
tgcgcacggttctgcctgccacccttgcgcgagcgcagcgacaaactggccttgatcaat
cggctgctggaacaggaggcgcacagcggcgcaatctccgtgggcatcggccccgccgcg
ctggaggtgctgctcgggtatgcctggccgggcaatgtgcggcaactgcgccatgtgctg
gcgtatgcctgtgcggtgtgcgacggcggcaccatccagctggctgacctgcccgtggag
gtgcgcggcgagcagatcgaggccgacgtggaagaacgtgtcagcccggaacgccaggtg
gtgctggatgcactgatccggcatcgctggaagccgtcgccgacggcccaggcgctgggg
atttcgcgggcgaccctgtatcgccgggtcaaccaactgggcatcgacatgccgggcaaa
catatctga
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