Pseudomonas sp. Y39-6: HXW90_21040
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Entry
HXW90_21040 CDS
T11426
Symbol
thrS
Name
(GenBank) threonine--tRNA ligase
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
psyq Pseudomonas sp. Y39-6
Pathway
psyq00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
psyq00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HXW90_21040 (thrS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
psyq01007
]
HXW90_21040 (thrS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psyq03016
]
HXW90_21040 (thrS)
Enzymes [BR:
psyq01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
HXW90_21040 (thrS)
Amino acid related enzymes [BR:
psyq01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
HXW90_21040 (thrS)
Transfer RNA biogenesis [BR:
psyq03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
HXW90_21040 (thrS)
Prokaryotic type
HXW90_21040 (thrS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
tRNA_SAD
TGS
Motif
Other DBs
NCBI-ProteinID:
QPO21865
LinkDB
All DBs
Position
complement(4710752..4712674)
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AA seq
640 aa
AA seq
DB search
MPTITLPDGSQRSFDHSVSVAEVAASIGAGLAKATVAGKVDGKLVDASDLITADASLQII
TPKDQEGLEIIRHSCAHLIGHAVKQLYPTAKMVIGPVIDDGFYYDIAYERPFTPDDLAAI
EQRMHALIEKDYDVIKKVTPRAEVIDVFTARGEDYKLRLVEDMPDEQAMGLYYHEEYVDM
CRGPHVPNTRFLKSFKLTKLSGAYWRGDAKNEQLQRIYGTAWADKKQLAAYVQRIEEAEK
RDHRKIGKRLNLFHLQEEAPGMVFWHPNGWTLYQVLEQYMRKVQRENGYLEIKTPQVVDR
SLWEKSGHWANYADNMFTTQSENRDYAIKPMNCPCHVQVFNQGLKSYRELPMRLAEFGAC
HRNEPSGALHGIMRVRGFTQDDAHIFCTEEQMQAESAAFIKLTMDVYRDFGFTEVEMKLS
TRPEKRVGSDELWDRAEAALAAALDSAGLAYDLQPGEGAFYGPKIEFSLKDCLGRVWQCG
TLQLDFNLPIRLGAEYVSEDNSRKHPVMLHRAILGSFERFVGILIEHYEGAFPAWLAPTQ
AVIMNITDKQADFAAEVEKTLNESGFRAKSDLRNEKIGFKIREHTLLKVPYLLVIGDREV
EMQTVAVRTREGADLGSMPVAQFAEFLAQAVSRRGRPDSE
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgccaactattactcttcccgatggcagtcaacgttcattcgatcattcggtttccgta
gccgaggtcgccgcatccattggtgccggcctggccaaggccaccgtggccggcaaggtc
gacggcaagctggttgacgccagcgacctgatcaccgccgatgccagcctgcaaatcatc
acgcccaaggatcaagaggggctggagatcattcgccactcttgcgcacacctgattggc
cacgcggtcaagcagctgtacccgacggcgaaaatggtgatcggcccggtcatcgacgat
ggcttctattacgacatcgcctacgagcgtccttttactccggacgatctggccgcgatc
gaacagcgcatgcacgcgctgatcgaaaaagattacgacgtgatcaagaaagtcacgccg
cgcgccgaagtgatcgacgtgttcactgcccgtggcgaagactacaagctgcgcctggtg
gaagacatgccggacgaacaggccatgggcctgtactaccacgaagaatacgtcgacatg
tgccgtggcccgcacgtgccgaacacgcgtttcctcaaatcgttcaagttgaccaagctg
tccggcgcctactggcgcggcgacgcgaagaacgagcaactgcagcggatctacggcacg
gcctgggctgacaagaagcagctggccgcctacgtccagcgcatcgaagaagccgagaaa
cgcgaccaccgcaagatcggcaagcgcctgaacctgttccacctccaggaagaagcgccg
ggcatggtgttctggcacccgaacggctggaccctgtatcaggtgctcgagcagtacatg
cgcaaggttcagcgcgaaaacggctacctggagatcaagactccccaggtcgttgaccgc
agcctgtgggaaaaatccgggcactgggccaactacgccgacaacatgttcactacccag
tcggaaaaccgcgactacgccatcaagccgatgaactgcccttgccacgtgcaggtgttc
aaccaaggcctgaagagctaccgcgagttgccgatgcgcctggccgagttcggtgcctgc
caccgtaacgagccgtcgggtgcgctgcacggcatcatgcgcgtgcgcggcttcactcag
gacgacgcccacatcttctgcaccgaagagcagatgcaggccgaatccgctgcgttcatc
aagctgaccatggacgtttatcgcgatttcggctttaccgaagtcgaaatgaagctgtcc
actcgtccggaaaaacgcgtcggttccgatgaattgtgggatcgcgccgaagccgcactg
gccgctgcgctagacagcgcgggccttgcgtatgatctgcagccgggtgagggcgccttc
tacggtccgaaaatcgagttttcgctgaaagattgtcttggtcgtgtctggcaatgtggt
actttgcagctcgattttaacctgccgatccgtctgggagccgaatacgtctccgaagac
aacagccgtaaacacccggttatgctgcaccgggcgatcctcggctcgttcgaacggttc
gtcggtatcctgatcgagcactacgagggcgcattccccgcgtggttggctccgacccag
gcagtgatcatgaatatcactgataaacaggccgattttgctgctgaagttgaaaaaact
ctcaacgaaagcggatttcgtgccaagtccgacttgagaaatgaaaagatcggctttaaa
atccgcgagcatactttgctcaaggttccctatcttttggttatcggagatcgggaagtc
gagatgcagactgtcgctgtgcgtactcgtgaaggtgctgacctgggctcgatgcccgtc
gcccagttcgctgagttcctcgcgcaagcggtttcccggcgtggtcgcccagattcggag
taa
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