Pseudomonas sp. Y39-6: HXW90_26585
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Entry
HXW90_26585 CDS
T11426
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
psyq Pseudomonas sp. Y39-6
Pathway
psyq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psyq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HXW90_26585 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psyq03400
]
HXW90_26585 (recC)
Enzymes [BR:
psyq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
HXW90_26585 (recC)
DNA repair and recombination proteins [BR:
psyq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HXW90_26585 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
QPO22865
LinkDB
All DBs
Position
complement(5896229..5899681)
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AA seq
1150 aa
AA seq
DB search
MPDAMPLSAGFMVVHGNRLDELRSLVVSWMRRYPLAPLENEIALVQSNGIAQWLKLALAE
DPEDDDMGGCGIAAAIDVQLPGSFMWQLYRMVLGRDEIPPKSLLDKAPLTWRLMRLLPEL
INQPHFEPLQRFLTDDSDLRKRYQLAERLADLFDQYQVYRADWLEDWAAGRHQLRNGRGE
SKPLDPANCWQAELWRALLLDVGEAGMAQSRAGVHQRFIERINSLEQAPPGLPSRVIVFG
ISSLPAQALEALAGLARFSQVLLCVHNPCRHHWSDIVADKDLLRNEYKRQARKAGMPVTI
DPQTLHQHAHPLLAAWGKQGRDYISLLDSYDDPNSYRAAFRDGRIDLFSDGEPTTLLNQL
QDDILELRPLNETRDLWPAVDLQRDTSIRFHIAHSAQREVEILHDQLLQRFSADPALRPR
DIIVMVPDVDSYAPHIRAVFGQLDRNDPRFIPFTLTDQGQRGRDPLLIAVEHLLKLPDSR
FPVSEILDLLDVPALRERFAIKERDLPTLHRWIEGAGIRWGLNAEQRAGLGLPHELEQNS
WRFGLRRMLLGYAVGTGVACDGIEPYDEIGGLDAALIGPLVALLDALSDAHQALSQPAAP
QEWGERLQRLMQLFFLPSSEHDDYLLGQLEQLRETWLETCESVGLQDELPLTVVREAWLA
GLDQGRLSQRFLAGAVNFCTLMPMRAIPFKLVCLLGMNDGDYPRAQPPLDFDLMGSDYRP
GDRSRREDDRYLLLEALLSARDQLYISWVGRSIRDNSERPASVLIGQLRDHLASGWQPSQ
SDAPLLDAMTQEHPLQPFSARYFHAGDPLFSYAREWQLLHEVTDAPPDNTELAAHRQEEP
LSLGQLQDFLRNPVKHFFSQRLKVFFEAAEVPLADEEPFVLDALQRYSLSDSLLNAALSQ
PDHVDQALTAQARRLQGSGLLPMVGFGECLRNELIEPLPGLLQRYQQLLALWPTPHTGAE
PISFEHQGIQLEGWISGLHRRSDGGLLSVTTIPNSIGSIKTRKWHRLIRPWVNHLVACAC
GLPLSTALVASDDTLLLAPLEPSSAQDILGDLLLAWHVGMAKPLPVAVKTAFAWLGQTDP
AKAAAAASKAYEGDGINTDGERRESPALTRQFPDYAALVASEAFEGWCETLYRPLINAAW
RSLTGEEAGA
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atgccggatgcgatgcctctcagcgcaggattcatggtggttcacggtaaccgcctggac
gaactgcgcagcctggtggtcagttggatgcgccgttatcccctggcccctctggaaaat
gaaatcgccctggtccagagcaacggcatcgcccaatggctcaagctggccctggccgaa
gatccggaagatgacgacatgggcggctgcggcattgctgcggcgatcgacgtgcaactg
cccggcagcttcatgtggcagctctatcgcatggtcctggggcgcgacgaaatcccgccc
aaatccctgctcgataaagccccgctgacctggcgcctgatgcgcctgctccccgagctg
atcaatcaaccgcacttcgagccgctgcagcgcttcctcacggacgactccgacctgcgc
aaacgctaccaactcgccgagcgattggccgacctgttcgaccaataccaggtctaccgc
gccgactggctggaagattgggccgccggccgccatcaactgcgtaacggccgcggcgaa
tccaaacccctcgaccccgccaactgctggcaagccgagttatggcgcgccctgctgctg
gatgtgggcgaagccggcatggcgcaaagccgtgccggtgtgcatcagcgctttatcgaa
cggatcaatagccttgagcaagcgccgccagggctgccttcccgagtgattgttttcggc
atttcctcattgcccgcccaagcactcgaagcgctcgccggcctggcgcgcttcagtcag
gtcctgctctgcgtccacaacccctgtcgccaccattggtccgacatcgtggccgacaag
gacttgctgcgtaacgaatacaaacgccaggcacgcaaagccggcatgccggtcaccatc
gacccgcaaaccttgcaccagcatgctcacccgttgctcgccgcctggggcaaacaaggt
cgcgactacatcagcctgctcgacagctacgacgatcccaacagctaccgcgcagccttc
cgcgacggccgcatcgacctgttcagcgacggcgaaccgaccacactgctcaaccagctc
caggacgatatcctcgaactgcgcccgctcaacgaaacccgcgacctctggcccgccgtc
gatctgcagcgcgatacctcgatccgctttcacatcgcccacagcgcccaacgcgaagtg
gaaatcctccacgaccaattgctccaacgcttcagcgccgatcctgcgttgcgtccccgc
gacatcatcgtcatggtccccgacgtcgacagttacgcgccgcacattcgcgcggtgttc
ggccagttggaccgcaatgacccgcgcttcatccccttcaccctcaccgaccagggccaa
cgcgggcgcgacccgctgttgatcgccgtcgaacacctgctcaagctccccgacagccgc
ttcccggtcagtgaaatcctcgacctgctcgacgtcccggccctgcgcgaacgcttcgcc
atcaaggagcgcgacctgccgacgctgcatcgctggatcgaaggcgccggcatccgctgg
ggcctcaatgccgaacagcgcgccggtctcggtctaccccacgagctggagcaaaacagc
tggcgatttggtttgcgccgtatgctgctcggttatgccgtgggcacgggtgtcgcctgt
gacggcatcgagccctacgacgaaatcggcggcctcgacgccgccttgatcggcccgctg
gtcgcgttgctcgacgcactcagcgacgcccaccaagccttgtcgcaacctgcggctccg
caagaatggggcgagcgcctgcaacgcttgatgcagctgtttttcctgcccagcagcgaa
catgacgactacctgttgggccagctcgaacagctccgcgaaacctggctggaaacctgc
gaatccgtcggcctgcaggacgagttaccgctcaccgtagtccgcgaagcgtggctagcc
ggtctcgaccaagggcgcctgtcccagcgcttcctcgccggagctgtcaatttctgcacc
ctgatgccgatgcgcgcgatcccgttcaagctggtctgcctgctcggcatgaatgacggc
gactacccacgcgcccaaccaccgctggatttcgacctgatgggcagcgactaccgcccc
ggcgaccgctcacgccgcgaagacgaccgctacctgctgctcgaagccctgttgtcagcc
cgcgaccagctctacatcagctgggtcggccgcagcattcgcgacaacagcgagcgcccg
gcatcggtattgatcggccaactgcgcgatcatctcgccagcggctggcagccaagccaa
agcgacgcaccgctgcttgacgcgatgacccaggaacacccgctccaacccttcagtgcg
cgctatttccacgccggtgacccgctgttcagctacgcccgcgaatggcagttgctgcac
gaagtcacggatgcgccgccagacaacaccgaactggcggcccatcgacaggaagaaccc
ctgagcctcggtcagttgcaggacttcctgcgcaacccggtcaaacacttcttcagccag
cgtctgaaagtattcttcgaggctgccgaagtgccgctggccgatgaggaaccctttgtc
ctcgacgccctgcaacgctacagcctgagcgacagcctgctgaacgccgcgctgagccag
cccgatcatgtcgaccaggcgctcaccgcccaggcccgtcgcctgcaaggcagtggcctg
ctgccgatggtcggtttcggcgagtgtctgcgcaacgaactgatcgagcccttgcccggc
ctgctgcaacgctatcaacaactgctggccctctggcccactccgcacaccggcgcggaa
ccgatcagtttcgagcatcaaggcattcagctcgaaggctggatcagcggcctgcatcgg
cgcagtgatggcggattgttgagcgtcaccaccatccccaacagcatcggctcgatcaag
acccgcaagtggcatcggctgattcgcccgtgggtcaaccacttggtggcctgcgcctgc
ggcctgccgttgagtaccgcgctggtggccagcgacgacaccttgttgctggccccgttg
gaaccctccagcgcccaggacatcctcggcgacctgctgctggcctggcacgtcggcatg
gccaaaccgctgcccgtcgcggttaaaactgcgttcgcctggctcggtcagaccgacccg
gccaaagccgcggcggccgcgagcaaagcctacgaaggtgatggcatcaacaccgatggc
gaacgccgcgaaagccccgcgctgacccggcaattccccgactatgcggccctggtggcc
agcgaagcattcgaaggttggtgcgaaaccttgtaccggcccctgatcaacgccgcctgg
cgatcactcactggcgaggaggccggcgcatga
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