Pseudomonas sp. Y39-6: HXW90_26725
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Entry
HXW90_26725 CDS
T11426
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
psyq Pseudomonas sp. Y39-6
Pathway
psyq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psyq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HXW90_26725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psyq03019
]
HXW90_26725
Enzymes [BR:
psyq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
HXW90_26725
Messenger RNA biogenesis [BR:
psyq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
HXW90_26725
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Gad2
Motif
Other DBs
NCBI-ProteinID:
QPO22888
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All DBs
Position
5930905..5932308
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AA seq
467 aa
AA seq
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MLKKLFQSFRSPLRRTQHKRSTPEVLNSSQHSLQRAQFSRYAVNIVERLQNAGYQAYLVG
GCVRDMLLNITPKDFDVATSATPEQVRAEFRNARIIGRRFKLVHIHFGREIIEVATFRAG
HPQNDEEEDTNQSSRNESGRILRDNVYGTLEEDAQRRDFTINALYYDPVSERILDYANGV
HDIRNNLIRLIGDPTQRYQEDPVRMLRAVRFAAKLNFGIERHTAAPIRELAPMLREIPSA
RLFEEVLKLFLSGYAADTFEMLVDLQLFDPLFPASAEALEYNPTYTHTLISEALINTDLR
IKQNKPVTPAFLFAALLWPALPKRVLRLQDRGMPPIPAMQEAAHELIAEQCQRIAIPKRF
TLPIREIWDMQERLPRRSGKRADLLLENPRFRAGYDFLLLRESAGEQTDDLGEWWTDYQD
ANDSERREMIRELGSKGDGVGEGPKKRRRSGSKRKRSAADASGAAGE
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagaagttgttccagtcattccgttctcccttgcgtcgaacgcaacacaaacgc
agcacgcctgaagtgctcaacagcagccaacattcgctgcaacgcgctcagttcagccgt
tatgcagtgaacatcgtcgaacgtttgcagaacgccggttaccaggcttatctggtgggc
ggctgtgtacgcgacatgttgctcaatatcacacccaaggacttcgacgtcgccaccagc
gccacgcccgagcaagtgcgcgccgagtttcgcaatgcgcgcatcatcggccgccgcttc
aagctggtgcatattcactttggccgcgaaatcatcgaggtcgcgaccttccgtgccggt
catccgcaaaacgatgaggaagaagacaccaatcagtcttcccgcaacgaaagcggacgc
atcctgcgcgacaacgtctacggcaccctggaagaagacgcgcagcgccgcgacttcacc
atcaacgccctgtattacgacccggtcagcgagcgcatcctcgattacgccaacggcgta
cacgatattcgcaacaacctgatccgcctgatcggcgacccgacgcagcgctaccaggaa
gacccggtacgcatgctgcgggcggtgcgtttcgccgcgaagctgaacttcggtatcgag
cgccacacggcggcaccgattcgcgaactggcgccgatgctgcgggaaatcccctcggcg
cgcctgttcgaagaagtgctcaagctgttcctctcgggctacgccgccgataccttcgaa
atgctcgtcgacctgcagttgttcgatcccttgttcccggcgagcgccgaagcactggaa
tacaacccgacgtatacccacaccctgatcagcgaagcgttgatcaacaccgacctgcgc
atcaaacagaacaaaccggtcaccccggcgttcctgtttgccgccctgttgtggccggcc
ttgcccaaacgcgtactgcgcctgcaggaccgtggcatgccgccgatcccggccatgcag
gaagccgctcacgagttgatcgccgagcagtgccagcgcatcgccatcccgaaacgcttc
accctgccgatccgcgagatctgggacatgcaggaacgcctgccgcgtcgcagtggcaag
cgcgccgacctgttgctggagaacccgcgcttccgtgccggctacgacttcctgctgctg
cgtgaaagcgccggcgagcagaccgacgacctgggcgaatggtggaccgactaccaggac
gccaatgacagcgagcgccgcgagatgattcgtgaactcggcagcaaaggcgatggcgtc
ggcgaagggcccaagaagcgccgtcgcagcgggagcaaacgcaagcgcagcgccgccgat
gcctcgggcgccgcaggcgaataa
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