Pseudomonas sp. Y39-6: HXW90_26775
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Entry
HXW90_26775 CDS
T11426
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
psyq Pseudomonas sp. Y39-6
Pathway
psyq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psyq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HXW90_26775 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psyq03019
]
HXW90_26775 (pnp)
03016 Transfer RNA biogenesis [BR:
psyq03016
]
HXW90_26775 (pnp)
Enzymes [BR:
psyq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
HXW90_26775 (pnp)
Messenger RNA biogenesis [BR:
psyq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
HXW90_26775 (pnp)
Transfer RNA biogenesis [BR:
psyq03016
]
Prokaryotic type
tRNA degradation factors
HXW90_26775 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
QPO22898
LinkDB
All DBs
Position
complement(5944691..5946796)
Genome browser
AA seq
701 aa
AA seq
DB search
MNPVIKKFQFGQSTVTLETGRIARQASGAVLVTVDDDVTVLVTVVGAKTADPSKGFFPLS
VHYQEKTYAAGKIPGGFFKREGRPSEKETLTSRLIDRPIRPLFPEGFMNEVQVVCTVVST
SKKTDPDIAAMIGTSAALAISGIPFDGPIGAARVAFHESTGYLLNPTYEQLKASSLDMVV
AGTSEAVLMVESEAKELTEDQMLGAVLFAHDEFQVVINAVKELAAEAAKPTWAWAPQAEA
TELLGAIRAEFGEAISQAYTITVKADRYARLGELKDQVVAKLSGEEGQPSASDVKAAFGE
IEYRTVRENIVNGKPRIDGRDTRTVRPLNIEVGVLPKTHGSALFTRGETQALVVATLGTA
RDAQLLDTLEGEKKDPFMLHYNFPPFSVGECGRMGGAGRREIGHGRLARRSVQAMLPAAD
VFPYTIRVVSEITESNGSSSMASVCGASLALMDAGVPMKAPVAGIAMGLVKEGEKFAVLT
DILGDEDHLGDMDFKVAGTAKGVTALQMDIKIKGITEEIMEIALGQALEARLNILGQMNQ
IIGQSRTELSENAPTMIAMKIDTDKIRDVIGKGGATIRAICEETKASIDIEDDGSIKIFG
ETKEAAEAARQRVLGITAEAEIGKIYVGKVERIVDFGAFVNILPGKDGLVHISMLSDARV
EKVTDILKEGQEVEVLVLDVDNRGRIKLSIKDVAAAKASGA
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
gtgaacccggttatcaaaaaatttcagttcggtcagtcgaccgttaccctcgagacaggc
cgtatcgcccgtcaagcctccggcgcagtgctggttaccgttgacgacgacgttaccgta
ctggtgaccgttgtaggcgccaagaccgcagacccgagcaagggcttcttccctctgtct
gttcactaccaggaaaagacttacgctgccggtaagatccctggcggtttcttcaagcgc
gaaggccgtccttccgagaaagaaaccctgacttcccgactgatcgaccgtccgatccgt
ccgctgttcccagaaggcttcatgaacgaagtgcaggttgtctgcaccgtcgtctccacc
agcaaaaagaccgatccggacatcgctgcgatgatcggtacctcggctgccctggctatc
tccggcattcctttcgatggcccgatcggcgccgcgcgcgtggctttccacgaaagcacc
ggctacctgctgaacccgacttacgagcaactgaaagcctcgagcctggacatggtcgtt
gccggtacctcggaagccgtactgatggttgaatcggaagccaaagagctgaccgaagac
cagatgctgggcgcggtactgttcgctcacgacgagttccaggttgtgatcaacgccgtc
aaagaactcgctgccgaagccgccaagccaacttgggcctgggctccgcaagccgaagcc
accgaactgctgggcgcgatccgtgccgagttcggcgaagcgatctcccaggcctacacc
atcaccgtcaaggccgaccgttacgctcgcctgggcgagctgaaggatcaggtcgttgcc
aagttgtccggtgaagaaggccagccttctgccagcgacgtcaaagcagcattcggcgaa
atcgaataccgcaccgttcgcgaaaacatcgttaacggcaagccacgtatcgacggtcgc
gacacccgcaccgtgcgtccgctgaacatcgaagtcggcgttctgccgaagactcacggt
tccgcgctgttcacccgtggcgaaacccaggccctggtcgttgcgaccctgggtactgcc
cgcgacgcacagctgctggacaccctggaaggcgagaaaaaagacccgttcatgctgcac
tacaacttcccgccgttctcggtgggcgaatgtggtcgcatgggtggcgccggtcgccgc
gaaatcggtcacggccgtctggcccgtcgttcggttcaggccatgctgccagccgccgac
gtgttcccgtacaccatccgtgtagtgtcggaaatcaccgagtccaacggttccagctcc
atggcttcggtctgcggtgcttccctggcactgatggacgctggtgtgccgatgaaggcg
ccggttgccggtatcgccatgggcctggtcaaagaaggcgagaagttcgccgtcctgacc
gacatcctgggtgacgaagaccacctgggcgacatggacttcaaagtagccggtaccgct
aaaggtgttaccgcgctgcagatggacatcaagatcaaaggcatcaccgaagagatcatg
gaaatcgctctgggccaagccctggaagcgcgcctgaacatcctcggtcagatgaaccag
atcattggtcagtcccgcaccgaactgtcggaaaatgctccgaccatgatcgcgatgaaa
atcgacaccgacaaaatccgtgatgtcatcggtaaaggcggcgcgaccattcgtgcgatc
tgtgaagagaccaaggcttcgatcgatatcgaagacgacggctcgatcaagatcttcggc
gaaaccaaggaagctgcagaagcggcgcgtcagcgcgttctgggcatcactgccgaagcc
gagatcggcaagatctacgtcggtaaagttgagcgcatcgtcgacttcggcgcattcgtc
aacatcctgccgggcaaagacggtctggttcacatctccatgctgagcgatgctcgtgtt
gagaaagtgaccgacattctgaaagaaggccaggaagtggaagtgctggtactggacgtg
gacaaccgcggccgtatcaagctgtccatcaaagacgtggcagcagccaaggcttcgggc
gcttaa
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