KEGG   Pseudomonas sp. Y39-6: HXW90_27555
Entry
HXW90_27555       CDS       T11426                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
psyq  Pseudomonas sp. Y39-6
Pathway
psyq03030  DNA replication
psyq03430  Mismatch repair
psyq03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:psyq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    HXW90_27555
   03430 Mismatch repair
    HXW90_27555
   03440 Homologous recombination
    HXW90_27555
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:psyq03032]
    HXW90_27555
   03400 DNA repair and recombination proteins [BR:psyq03400]
    HXW90_27555
Enzymes [BR:psyq01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     HXW90_27555
DNA replication proteins [BR:psyq03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     HXW90_27555
DNA repair and recombination proteins [BR:psyq03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     HXW90_27555
SSDB
Motif
Pfam: RNase_T Rv2179c-like
Other DBs
NCBI-ProteinID: QPO23045
LinkDB
Position
complement(6126643..6127254)
AA seq 203 aa
MERIAVIDFETTGITPSSHCRATEIAVVILERGQIVDRYQSLMNAGVRVPGFIEQLTGIS
NAMLRSAPPAERVMNEVNEFVGTTPLLAHNAAFDQKFWDFELGLIRRTRLQKFACSLLLA
RRLMPAAPNHKLGTLNSYAQLPHTGQAHRAMADAEMAANLTAHLAEQLRRTHGLRELSHD
LLCTLQKVPAAKINEHLKKHRGF
NT seq 612 nt   +upstreamnt  +downstreamnt
ttggaacgtatagcggtcatcgactttgaaaccaccggcatcaccccgagcagccactgc
cgggccacggaaatcgcggtggtcatcctcgaacgtggccagatcgtggaccgctaccag
agcctgatgaacgccggcgtgcgcgtgccgggctttatcgaacagctcaccggcatcagc
aacgccatgctgcgcagcgcgccgccggccgagcgggtgatgaacgaagtcaacgagttc
gtcggcaccacaccgctgctggcgcacaacgccgcgttcgaccagaagttctgggacttc
gaactgggcctgatccgccgcacccgcctgcaaaaattcgcctgctccctgctattggcc
cgccgcctcatgcctgctgcacccaaccacaaactcggcaccctcaacagctacgcccaa
ctgccccacaccggccaggctcaccgggccatggccgatgcggagatggcggctaacctg
acggcgcacctggccgagcaactgcgacggacccatggcttgcgcgagctgtcccacgac
ctgctgtgtaccttgcagaaagtcccggcggcgaagatcaatgagcatttgaagaagcat
cgcgggttctga

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