Pseudomonas sp. Y39-6: HXW90_27845
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Entry
HXW90_27845 CDS
T11426
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
psyq Pseudomonas sp. Y39-6
Brite
KEGG Orthology (KO) [BR:
psyq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psyq03000
]
HXW90_27845
Transcription factors [BR:
psyq03000
]
Prokaryotic type
Helix-turn-helix
Other families
HXW90_27845
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
QPO23099
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Position
complement(6184706..6186631)
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AA seq
641 aa
AA seq
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MHHDHFSRHAQQVLTVTRGQDLSQGPGSDPSIARSWLRCLEDYHLDPALSIAPTVLEHGR
LLESRERLQQVLHIAGGEMNSLHQQLSGAGHAVLLTDARGVILNCVTAPSERKIFERAGL
WLGADWSEACEGTNGIGTCLVERQSLTIHRDEHFRGRHTGLTCSASPVFDPHGELLAVLD
VSSAREAVSRQSQFHTMALVNLSAKMIESCYFLRHFEHHWLLRFHLQAESVGLFSEGLLA
FDGEGRICAVNQSALNLLGQMRGGLLGQPVEALFECTLDQLLGRASANATASWPLRTRDG
RHLFAALRGQPRSVPVPVPPQPVVAAKPERLLGICLGDSALQSDFRKALRVFERDVPLLV
NGETGSGKEAFAKAVHQASQRADKAFVALNCAAIPESLIESELFGYRGGSFTGARKEGMR
GKLQQADGGTLFLDEIGDMPLALQTRLLRVLEDRLVVPIGGEPQAVNVRVISATHRDLLQ
RVQAGSFREDLYYRLNGLEIGLPPLRERSDKPQLLDFLLAQEAGEQTITLDAGARQALLA
FAWPGNVRQLRTVLRTLVALCDGALIGVDDLPPMIRPASLTTPAADVPPLSLLEDAERLA
LLKVLTQQRWHMTLVAERLGVSRNTLYRKLRKHGIELRSAL
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgcatcacgatcatttcagtcgccatgcccagcaagtcttgaccgtgacccgtgggcaa
gacctttcccagggccccggcagcgacccgtccatcgcccgctcctggctgcgttgcctg
gaggattatcacctcgaccctgcgctgagcatcgcccccaccgtgctcgaacatggccgt
ctgctggaaagccgcgagcgcctgcagcaggtgctgcacatcgctggcggcgagatgaac
agcctgcatcagcaactttcgggcgccggtcacgccgtgttgctcaccgacgcgcgcggg
gtgatcctcaactgcgtcaccgcgccgtccgagcgcaagattttcgagcgcgccgggttg
tggctcggcgccgactggagcgaggcctgcgaaggcaccaatggcatcggcacctgcctg
gtggagcgccagtcgttgaccattcaccgcgatgagcattttcgcgggcgccacaccggg
ctgacctgttcggcgagcccggtgttcgatccccatggtgagttgctggcggtgctggac
gtgtcgtcggcgcgggaagcggtgtcgcgtcagagccagttccacaccatggcgctggtc
aacctgtcggcgaagatgatcgagagttgttacttcctgcgtcactttgaacaccactgg
ctgctgcgttttcacttgcaggcggagtccgtgggcttgttcagtgaagggctgctggcg
ttcgacggtgaagggcgcatttgcgcagtcaaccaaagtgccctgaacctgttggggcag
atgcgtggtggcttgctggggcagcctgtggaagcgcttttcgaatgcaccctggatcaa
ctgctgggccgcgccagcgccaatgccacagcgagttggccgctgcggacgcgggacggt
cgacatctgtttgccgcgttgcgcggccagccgcgcagtgtgccggtgcccgtaccgccg
cagccggtggttgccgccaagcccgagcgtctgctcggtatctgcctgggcgattccgcg
ttgcaaagcgattttcgcaaggcgttgcgcgtgttcgagcgtgatgtgccgctgctggtc
aacggtgaaaccggttccggcaaagaggccttcgccaaggccgtacaccaggccagccag
cgtgcggacaaggcttttgttgcgctcaactgcgccgccatcccggaaagcctgatcgaa
agcgaactgttcggctatcgcggcggcagtttcaccggtgcccgcaaggaaggcatgcgc
ggcaagctgcaacaggcagatgggggcacgttgttcctggatgaaatcggcgacatgccc
ctggctttgcaaacccggctcttgagggtgctggaggatcgcctggtagtgcccatcggc
ggcgagccccaggcggtaaacgtgagagtcatcagcgccacccaccgtgatttgttgcag
cgtgtgcaggccggcagctttcgtgaagatttgtactaccgactcaatggcctcgaaatc
ggcttgccgccgttgcgcgagcgcagtgataagccgcaattgctggattttctgctggcc
caggaagccggggagcagacgataacgctcgatgccggcgcgcgtcaggcattgctggcg
ttcgcctggccgggcaatgtgcggcagttgcgcacggtgttgcgcaccctggttgcactg
tgtgacggcgcgttgatcggtgtcgatgatttgccgccgatgatccgcccggcgtccttg
actacgcctgctgcggatgtccccccgctgtcgctgcttgaggatgccgagcgcctggca
ttgttgaaggtcctgacgcagcagcgctggcatatgacccttgtggctgaacggttgggg
gtgagccgcaacacgttatatcgaaagttacgcaaacatggcattgaactgcgttcggcg
ttgtaa
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