Pseudomonas sp. Y39-6: HXW90_28005
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Entry
HXW90_28005 CDS
T11426
Symbol
ispA
Name
(GenBank) (2E,6E)-farnesyl diphosphate synthase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
psyq Pseudomonas sp. Y39-6
Pathway
psyq00900
Terpenoid backbone biosynthesis
psyq01100
Metabolic pathways
psyq01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
psyq00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
HXW90_28005 (ispA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
psyq01006
]
HXW90_28005 (ispA)
Enzymes [BR:
psyq01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
HXW90_28005 (ispA)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
HXW90_28005 (ispA)
2.5.1.29 geranylgeranyl diphosphate synthase
HXW90_28005 (ispA)
Prenyltransferases [BR:
psyq01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
HXW90_28005 (ispA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
QPO23131
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All DBs
Position
6218483..6219370
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AA seq
295 aa
AA seq
DB search
MIDAYQASSQARVNAALEPLFVAPSPEMKRLYEAMRYSVMNGGKRVRPLLAYAACEALGA
PAEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLA
FSALLDPSLSSVNAEIRLRMVTTLAVAAGPAGMVGGQAIDLGSVGQKLDQQALEHMHRHK
TGALIEAAVHLGALASGRAEAAQLAALQVYSGAIGLAFQVQDDILDVESDTATLGKRQGA
DIARDKPTYPALLGLDAAKAYALELRDQALAALRPFDAAAEPLRDLARYIVERRH
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgatcgacgcgtatcaggccagtagccaagcccgggtcaatgcggcgctggagcccttg
tttgttgcgccaagcccggaaatgaaacggctctacgaggccatgcgctacagcgtgatg
aatggcggcaagcgggtgcgtccgttgctggcctatgcggcctgcgaagccctcggcgcg
cctgccgaacaggccaacggcgcggcctgcgcggtggagttgattcacgcctattccctg
gtgcatgacgatttgccggcgatggacgacgatgacctgcgtcgcggccagccgaccacc
cataaagcctttgacgaagcctgcgcgatcctcgccggcgatggcctgcaaagcctggcg
ttcagcgcattgctcgacccgagtttgagcagcgtgaatgccgagatccgcttgcgcatg
gtcaccaccctggcggttgccgcaggccccgccgggatggtcggtggccaggccatcgat
ctcggctcggtgggccagaagctcgatcaacaggccctcgaacacatgcatcggcacaag
accggcgccctgatcgaagccgccgtccacctgggcgccctggccagtgggcgtgccgaa
gccgcgcaattggcggctttgcaggtttactccggggccatcggcctggcgttccaggtg
caggacgacattctcgacgtagaaagtgacaccgccaccctgggcaaacgccagggcgcc
gatatcgcacgggacaaaccgacttatcctgcgctgctcgggctggatgccgccaaggct
tatgccctggaactgcgcgaccaggccctggccgccctgcgacctttcgacgcagcagcc
gagcccctgcgagacctggcgcggtacatcgtcgaacgtcgtcactga
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