KEGG   Pseudomonas sp. Y39-6: HXW90_28060
Entry
HXW90_28060       CDS       T11426                                 
Symbol
ribD
Name
(GenBank) bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
psyq  Pseudomonas sp. Y39-6
Pathway
psyq00740  Riboflavin metabolism
psyq01100  Metabolic pathways
psyq01110  Biosynthesis of secondary metabolites
psyq01240  Biosynthesis of cofactors
psyq02024  Quorum sensing
Module
psyq_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:psyq00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    HXW90_28060 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    HXW90_28060 (ribD)
Enzymes [BR:psyq01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     HXW90_28060 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     HXW90_28060 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD Phage_Gp84
Other DBs
NCBI-ProteinID: QPO23142
LinkDB
Position
complement(6229285..6230421)
AA seq 378 aa
MNPPSAEQAILDAHYMARALELARNGLYTTHPNPRVGCVIVRDGQIVGEGWHVRTGEPHA
EVHALRAAADKARGATAYVTLEPCSHYGHTPPCADALVSAGVARVVAAMQDPNPDVAGRG
MQRLAQAGIEVRSGVLEVEARALNKGFLKRMEHGLPFVRVKLAMSLDGRTAMASGESQWI
TGPAARAAVQRLRAEASVVLTGADTVLADGARLTVRAAELGLDAETTALAMSRPPLRVLI
DGRLRVPLNAPFFKAGPALVITCVTAENQFPRGPECLVVPGVDGQVDLRSALVALAARGV
NDVLVEAGPSLAGAFAQQGLVDEYVIFVAGKFLGSAARPLLDWPLEKLADAPQLKITEMR
AVGDDWRVTAIPVPAASV
NT seq 1137 nt   +upstreamnt  +downstreamnt
atgaacccaccgtctgctgaacaggccatcctcgacgcccattacatggcccgcgccctc
gaactggcgcgcaacggcctgtacaccacccatcccaacccgcgtgtggggtgtgtgatt
gtgcgcgatgggcagatcgtcggcgaaggttggcatgtacgtaccggcgagccccatgca
gaagtgcatgccttgcgcgcagccgctgacaaagcccgtggcgccacggcctacgtcacc
ctggaaccctgcagccattacggccataccccgccgtgcgccgatgcgctggtgagtgcc
ggggtggcgcgggtggtcgcggcgatgcaggaccccaacccggacgtcgccgggcgcggt
atgcagcgcttggcccaggccggcatcgaagtgcgcagcggtgtgctcgaagtggaagcg
cgggcgctcaataaaggtttcctcaagcgcatggaacacggcctgccgtttgtgcgggtc
aagctggcgatgagcctggacggccgcaccgcgatggccagcggcgagagccaatggatc
accggccccgccgcccgcgccgccgtgcagcgcctgcgcgccgaggccagcgtagtgctg
accggcgccgacaccgtgctggccgatggtgcgcgcctgaccgtgcgcgccgccgaactc
ggcctggacgcagaaaccaccgcgctggccatgtcgcgtccgccgctgcgcgtattgatc
gacggccgcctgcgggtgccgctcaatgcaccgttcttcaaggccggcccggcgctggtc
atcacctgtgtcactgcggaaaaccagttcccccgtggccccgagtgcctggtggtgccc
ggtgtcgatggccaggtcgacctgcgctcggcgctggtggcgttggcggcccgtggcgtc
aacgacgtgctggtggaagccgggccaagcctggcgggcgcgttcgcccagcagggcctg
gtggacgaatacgtgattttcgtcgccggcaagttcctcggctcagcagcccggcctttg
ctggactggccgcttgagaaactggccgacgcgccccaactcaagatcactgaaatgcgc
gctgtgggcgatgactggcgagtcactgccatccctgtgccagcagcgagcgtataa

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