Pseudomonas sp. Y39-6: HXW90_28120 Help Entry HXW90_28120       CDS       T11426                                  Name (GenBank) DEAD/DEAH box helicase   KO K03724   ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] Organism psyq  Pseudomonas sp. Y39-6 Brite KEGG Orthology (KO) [BR:psyq00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:psyq03400]     HXW90_28120 Enzymes [BR:psyq01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.4  DNA 3'-5' helicase      HXW90_28120     5.6.2.6  RNA 3'-5' helicase      HXW90_28120 DNA repair and recombination proteins [BR:psyq03400]  Prokaryotic type   Other factors with a suspected DNA repair function    DNA helicases     HXW90_28120 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DEAD_assoc WHD_4th_Lhr DEAD WHD_Lhr WHD_3rd_Lhr Helicase_C ResIII Cas3-like_C_2 MarR_2 MarR HTH_IclR RPA_C WHD_DprA Motif Other DBs NCBI-ProteinID:  QPO23154 LinkDB All DBs Position 6238732..6242979 Genome browser AA seq 1415 aa AA seqDB search MNLPETTNTVLNGFHPAVSAWFRSTFPSVTHAQAQAWPLIRQRRSTLIAAPTGSGKTLTA FLAVLDDLVHQGLANGGQLPDETQVVYVSPLKALSNDIQINLQTPLTGITAHLQQLGLPP LAIRTAVRTGDTPQKDRVLMRKRAPHILVTTPESLYVLLGSDSGRQMLASTRTVIVDEIH AIAAGKRGSHLALSLERLQGLCAEPLIRIGLSATQKPIEAVSRFLVGTARPCAIVDIGHA RPRDLDIEVPSVPLSAVMANDVWELVYDRLAALAREHRTTLIFVNTRRLAERLARHLSER LGKSAVAAHHGSLAKELRLDAEQRLKAGALQVLIATASLELGIDIGEVDLVCQIGSPGSI NGFLQRVGRSGHQVGGTPKGRLFATTRDDLIECAALLDCVRRGELDTLHIPVAPLDVLAQ QIVAEVSAREWPEQALLELIHRAAPYAELDERHYQALVQMLCDGYNGRQGIRSAYLHRDA VTGTLRGRRGARLTAVTSGGTIPDNADYSVLLEPQGLNIGSVNEDFAVESIAGDVFQLGN TSYRILRVEAGKVRVEDAHGQPPTIPFWLGEAPGRSRELSAAVARLQGQLDELLGATPGD LQPTLAWLTDTLGLNRASAEQIVDYLARARLALSALPSQDTLIMERFFDESGGTQLIIHT PFGSRINRAWGLALRKRFCRTFNFELQAAASENAIVLSLSTSHSFALDEVWRYLNSQTAE HLLIQAVLDAPLFGVRWRWNAGVALALPRFTGGRKVAPQIQRMKSEDLIASVFPDQIACL ENLAGEREVPDHPLVEQTLDDCLHEAMDSDAWLALLRRIERGEVRLISRDLPAPSPMAAE ILSARPYTFLDDAPLEERRTQAVLNRRWSDPQSTDDLGALDADAIAGVREEAWPAPHGLD EMHEALMSLACIVDSEVTPQWRQWLQTLAKGGRACHLPQGQWVAVERLSCLRAIYPNDLP LLPGFDEPWTFDDALVEVLRARLGGFGPLSLIEIAAPLGLPVTDIAQALARLEQEGYVLR GRFSPGAREEQWCERHLLARIHRYTVKRLRREIEPVALQDFMRFLFDWQHLSDGTRGQGS AMLPQIVAQFEGYAAATSAWDSDLLSARLKDYTSTWLDDLCRSGKLVWTRLSNKPGATAL RSTPVVLLPRSQVPLWSGLTEQTDSTTLSPKAQKVHQTLREHGALFFDELAHEAHLLRSE LETALQELVGAGLVNADSFAGLRALTTPASKRQARSSRRGRGAFVGGMDDAGRWALIRRP STAAGPHSAETLEHVAMTLLRRYGVVFWRLLEREADWLPNWRELLRTFHRLEARGEIRGG RFVSGLAGEQFALPEAIPLLREVRRRAHDGSLIAVCGADPLNLVGTLLPGSKVPAVSGNR IVYRDGLPAAVMVAGKQQILLDVDQQAVQEKLIRH NT seq 4248 nt NT seq  +upstreamnt  +downstreamnt atgaaccttcctgaaacaaccaatacggtcttgaacggctttcaccccgccgtcagcgcc tggttccgcagcaccttcccctcggtgacccacgcccaggcccaggcgtggccgctgatc cgccagcgccgctcgacgctgatcgccgcacccaccggctccggcaagacgctgacggcc ttcctcgcagtgctcgatgacctggttcatcaaggcctggccaacggcgggcaactgccg gatgaaacccaggtggtgtatgtgtcgccgctcaaggcgctgtccaacgacatccagatc aacctgcaaaccccgctgaccgggatcaccgcgcatttacagcaactgggcctgccaccg ctggcgatccgcaccgccgtgcgtaccggcgacacgccgcaaaaagaccgcgtgctgatg cgcaagcgtgcgccgcatattctggtgaccacgccggaatcgctctacgtgctgctgggc tcggactccggccggcagatgctcgccagcacgcgcacggtgatcgtcgatgagatccat gcgatcgcggcgggcaaacgcggcagtcacctggccctgagcctcgaacgcctgcaaggc ttgtgcgccgagccgttgatacgcatcggtctgtcggccacgcaaaaacccatcgaggcg gtgtcgcgttttctggtgggcacggcacgtccgtgcgcgatcgtcgacatcggccatgcg cgcccgcgtgacctggatatcgaagtgccgtcggtgccgctgtcagcggtaatggccaac gacgtgtgggaattggtctacgaccgcctcgccgccctcgcccgcgaacaccgcaccacg ctgattttcgtcaacacccggcgcctggccgaacgcctggcgcggcatttaagcgagcgc ctgggcaagtccgccgtggccgcgcaccacggcagcctggccaaggagttgcgcctggac gccgaacaacggctcaaggccggcgcgctgcaagtgctgatcgccaccgcatccctggag ttggggatcgatatcggcgaggtcgacctggtgtgccagatcggctcgcccggttccatc aatgggtttctgcaaagagtcggccgctccgggcaccaggtcggcggcacgcccaagggg cgcctgttcgctaccacccgcgatgacctgatcgaatgcgccgccctgctcgactgcgtg cgccggggcgagttggacaccttgcacattccggtcgcgccgctggacgtgctggcccag caaatcgtcgccgaagtcagcgcacgggaatggccggaacaggcgctgctcgaacttatc caccgcgccgcgccctatgccgagctggatgaacgccattaccaggcgctggtgcagatg ctctgcgacggctacaacggccgccagggcatccgcagcgcctacctgcaccgcgacgcc gtgaccggcaccctgcgcggccgtcggggcgccaggctgaccgccgtgaccagcggcggc accatccccgacaacgccgactacagcgtgttgctcgagcctcagggcctgaacatcggc agcgtcaacgaagacttcgcggtggaaagcatcgccggggatgtcttccagctcggtaat acgtcctaccggatcttgcgggtcgaagccggcaaggtgcgggtcgaggacgcccatggc cagccgccgaccatcccgttctggctcggcgaagcgccggggcgcagccgcgaactgtcg gcggcggtcgcgcgtttgcagggccagttggacgaactgctcggcgccacgcccggcgat ctgcagcccaccctcgcctggctcaccgacaccctgggcctgaaccgcgccagcgccgag cagatcgtggattacctggcccgcgcgcgcctggcgctcagcgcgttgccgtcccaggac acgctgatcatggagcggtttttcgacgagtccggcggcacccaactgatcatccacacg ccgttcggcagccgtatcaaccgcgcctggggcctggcgctgcgcaagcgtttctgccgc accttcaacttcgaactgcaagcggcggccagcgagaatgcgatcgtgctgtcgctgtcc accagccacagtttcgcgctggatgaggtgtggcgttatctcaacagccagaccgccgag cacctgctgatccaggccgtgctcgacgcgccgttgttcggcgtgcgctggcgctggaac gccggggtggccctggcgttgccgcgttttaccggcgggcgcaaggtggcgccgcagatc cagcggatgaaaagcgaagacctgatcgccagcgtgtttcccgaccagatcgcgtgcctg gaaaacctcgccggcgagcgcgaagtacccgaccacccgctggtcgaacaaaccctggat gactgcctgcacgaagcgatggacagcgacgcctggctggccctgttgcggcgcatcgag cgcggcgaggtacgcctgatcagccgcgacctgccggcgccctcgcccatggccgcggaa attctcagcgcgcggccctacacctttctcgacgacgcgccgctggaagaacgccgcacc caggccgtgctcaaccggcgctggagcgacccgcagagcaccgacgaccttggcgcgctg gacgccgacgccatcgccggcgtgcgcgaagaggcctggccggcgccccatggcctggat gaaatgcatgaggcgttgatgagcctggcgtgcatcgtcgacagcgaggtcacgccgcaa tggcggcagtggttgcaaacgctggccaagggcggacgcgcctgtcatctgccccaaggc cagtgggtggcggtggaacgcctgagttgcttgcgggcgatttaccccaacgacttgccg ctgttacccggcttcgatgagccctggaccttcgatgacgcgctggtggaagtgctgcgc gcgcgcctcggggggttcggcccgctgagcctgatcgaaatcgccgcgccccttgggctg ccggtgaccgacatcgcccaggccctggcccgcctggagcaggaaggctatgtgttgcgc gggcgtttcagccccggcgcccgcgaggaacaatggtgcgaacggcacctgctggcgcgg attcatcgctacacggtcaagcgcctgcgccgggaaatcgagcctgtggcgttgcaggac ttcatgcgctttctgttcgattggcagcacctgtccgacggtacgcgtggccagggcagc gcgatgttgccgcagatcgtcgcccagttcgaaggctacgcggcggccacctcggcctgg gacagtgacttgctcagcgcgcggctcaaggattacacatcaacctggctcgacgacctg tgccgcagcggcaagctggtgtggacacgcctgagcaacaagcccggcgccaccgccctg cgcagcacgcccgtggtgctgctgccgcgcagccaggtgccgctgtggagcgggctgacc gaacagaccgacagcacgacgttgtcgcccaaggcgcagaaagtccaccagaccctgcgc gaacacggcgcgttgtttttcgatgagctggcccacgaagcccatctgctgcgcagcgag ctggaaacggcgctgcaggagctggtcggtgccggcctggtgaacgccgacagtttcgcc gggctgcgtgcactgaccacgcccgcgagtaaacgccaggcgcgcagcagccggcgcggg cgcggtgcatttgtcggcggcatggacgatgccgggcgctgggcgctgatccggcgcccg tcgaccgccgccggcccgcactcggccgaaaccctggagcatgtggcgatgaccttgctg cgtcgctacggcgtggtgttctggcgactgctggagcgcgaggcggattggctgccaaac tggcgcgaactgttgcgcacctttcaccgcctggaggcacgcggggagattcgcggcggg cggttcgtcagcgggttggcgggcgagcagtttgcgttgccggaagcgatcccgctgctg cgtgaggtgcggcggcgggcccatgatggaagcctgatcgcggtgtgcggggctgatccg ctgaacctggtgggcacgctgctaccgggcagcaaggtgccggcggtgagtggtaaccgg attgtgtatcgcgatgggctgccggcggcggtgatggtggctggcaagcaacagatactg ctggatgtggatcagcaggcggtgcaggagaagttgatcaggcattga

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