Pseudomonas syringae CC1557: N018_00745
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Entry
N018_00745 CDS
T03014
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
psyr
Pseudomonas syringae CC1557
Pathway
psyr00300
Lysine biosynthesis
psyr00470
D-Amino acid metabolism
psyr01100
Metabolic pathways
psyr01110
Biosynthesis of secondary metabolites
psyr01120
Microbial metabolism in diverse environments
psyr01230
Biosynthesis of amino acids
Module
psyr_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
psyr00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
N018_00745 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
N018_00745 (dapF)
Enzymes [BR:
psyr01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
N018_00745 (dapF)
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Gene cluster
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Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
AHG38848
UniProt:
W0MP87
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Position
complement(155116..155946)
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AA seq
276 aa
AA seq
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MLLRFTKMHGLGNDFMVLDLVSQHAHILPKHAKQWGDRHTGIGFDQLLLVEAPNNPDVDF
RYRIFNSDGSEVEQCGNGARCFARFVLDKRLTAKKQIRVETKGGIIELDIRSDGQISVDM
GPPRFVPADIPFQAPEQATRYSVEVDGQNVELAAVSMGNPHAVLRVDDINNAPVHELGPK
LEHHPRFPARVNVGFLHVVDRQRAQLRVWERGAGETQACGTGACAAAVAAISQGWMDSPL
LIDLPGGRLSIEWAGPGHSVMMTGPATRVYEGQVRL
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgcgttttaccaagatgcacgggctgggtaacgacttcatggtcctggacctg
gtgagtcagcacgcgcatatcctgcccaagcacgccaaacagtggggcgaccgccacacg
ggtatcggttttgaccagctattgctggtcgaggctccgaacaacccggatgtggacttt
cgctatcgcatcttcaactcggacggttccgaggtcgaacagtgcggcaatggcgcacgc
tgtttcgcgcgcttcgtgctcgacaagcgcctgactgccaaaaaacagatacgggtcgag
accaaaggcggcatcatcgaactggatatccgcagcgacgggcagatcagtgtcgacatg
ggcccgccgcgcttcgttccggcagacatcccctttcaggcacccgagcaggcaacacgt
tactcggtcgaagtcgacggacagaacgtcgagctggccgcggtatcgatgggcaatcct
cacgccgtgctacgggtcgatgacattaacaatgcgccggtgcatgaactggggccgaaa
cttgaacaccacccgcgctttccggcgcgggtcaacgtcggcttcctccacgtggtggac
cgccagcgtgcgcagttgcgtgtctgggaacgcggtgccggggaaacccaggcctgtggc
accggtgcctgtgcagcagcagtggccgccatcagccaaggctggatggactcgcccctg
ttgatcgacctgcccggaggtcgcctgtccatcgaatgggccggcccgggacactccgtg
atgatgaccggccctgcgactcgggtctacgaaggccaagttcgtctttaa
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