Pseudomonas syringae CC1557: N018_06505
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Entry
N018_06505 CDS
T03014
Name
(GenBank) RNA helicase
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
psyr
Pseudomonas syringae CC1557
Brite
KEGG Orthology (KO) [BR:
psyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psyr03009
]
N018_06505
Enzymes [BR:
psyr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
N018_06505
Ribosome biogenesis [BR:
psyr03009
]
Prokaryotic type
rRNA helicases
N018_06505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AHG39912
UniProt:
W0MNC0
LinkDB
All DBs
Position
1367014..1368351
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AA seq
445 aa
AA seq
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MFSEFALHERLLKAVAELKFVEPTPVQSAAIPLALQGRDLRVTAQTGSGKTAAFVLPILN
RLIGPAKVRVDIRAVILLPTRELAQQTLKEVERFSQFTFVKAGLVTGGEDFKAQAAMLRK
VPDILIGTPGRLLEQLNAGNLDLKHVEVLVLDEADRMLDMGFSEDVERLAGECAGREQTM
LFSATTGGAGLREMIGKVLRDPQHLQVNNVSELASGTRHQIITADHNVHKEQVLNWLLSN
ETYQKAIIFTNTKAMADRLYGRLVALEYKAFVLHGDKDQKDRKAAIDRLKQGGAKIMVAT
DVAARGLDVEGLDMVINFDMPRSGDDYVHRVGRTGRAGSDGLAISLICHGDWNLMSSIER
YLKQSFERRVIKEVKGTYGGPKKVKASGKAVGVKKKKTDVKGDKKKVAAKGPTKRKTANR
PKSDLVSQDGMAPLKKRSTPAPAAE
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
gtgttttccgaattcgccctgcacgaacgcctgcttaaagctgtggccgagcttaaattt
gtcgagcctacgcctgtgcagtcggccgccatcccgttggctttgcaagggcgcgacctg
cgggtgactgcgcaaaccggtagcggcaagactgcggcatttgtactgccgatcctcaac
cgcctgatcggtcctgccaaggttcgcgtcgatatccgcgcggtgatcctgctgccgacc
cgcgagctggcgcaacagaccctcaaggaagtcgagcggttctcccagttcacgttcgtc
aaggccggtctggtgactggcggcgaagacttcaaggctcaggcggccatgctgcgcaag
gtgccggatatcctcatcggtacgccgggtcgtctgctggaacagctcaacgcgggcaat
ctggacctcaagcacgttgaagtgctggtactggacgaagccgaccgcatgctggacatg
ggcttctccgaagacgtcgagcgtctggcgggcgagtgcgccgggcgtgagcagaccatg
ctgttctccgcgaccaccggcggtgccggtctgcgtgaaatgatcggcaaggtgctcagg
gacccacagcatctgcaagtcaacaacgtcagcgaactggcttccggcacacgccaccag
atcatcactgccgaccacaacgttcataaagagcaggtcctgaactggctgctgtcgaac
gagacttaccagaaagccattatcttcaccaacaccaaggcgatggctgatcgtctgtac
ggtcgtctggtggcgctggaatacaaggcgttcgtgctgcatggcgacaaggatcagaag
gaccgcaaggcggccattgatcgtctgaagcagggcggcgcgaagatcatggtcgccacc
gatgtggcggcacgcggtcttgatgtcgaaggcctggatatggtgatcaacttcgacatg
ccacgcagcggcgacgactatgttcaccgcgtcggccggaccggtcgtgcaggcagtgac
ggtctggcgatctcgctgatctgccacggtgactggaacctgatgtcgagcatcgagcgc
tacctcaagcagagcttcgagcgccgcgtcatcaaggaagtcaaaggcacttacggcggc
cctaaaaaggtcaaggcgtcaggcaaggcggtcggcgtcaagaagaaaaagaccgacgtg
aagggtgacaagaaaaaagtcgccgccaaaggtccgaccaagcgcaagacagccaaccgt
cccaagtctgacctggtcagccaggacggcatggcaccgctgaaaaaacgcagcaccccg
gcacccgccgctgagtga
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