KEGG   Pseudomonas syringae CC1557: N018_08340
Entry
N018_08340        CDS       T03014                                 
Name
(GenBank) RNA polymerase sigma 70
  KO
K02405  RNA polymerase sigma factor FliA
Organism
psyr  Pseudomonas syringae CC1557
Pathway
psyr02020  Two-component system
psyr02025  Biofilm formation - Pseudomonas aeruginosa
psyr02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:psyr00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    N018_08340
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02025 Biofilm formation - Pseudomonas aeruginosa
    N018_08340
  09142 Cell motility
   02040 Flagellar assembly
    N018_08340
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:psyr03021]
    N018_08340
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:psyr02035]
    N018_08340
Transcription machinery [BR:psyr03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     N018_08340
Bacterial motility proteins [BR:psyr02035]
 Flagellar system
  Flagellar assembly proteins
   Stator
    N018_08340
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r2 Sigma70_r3 Sigma70_r4_2 HTH_23 HTH_30 UPF0122 MarR_2 GerE Rv2175c_wHTH Phage_terminase
Other DBs
NCBI-ProteinID: AHG40254
UniProt: W0MNV8
LinkDB
Position
1746733..1747473
AA seq 246 aa
MTASGYQMYSKTSRNSQYELIERYAPLVKRIAYHLLARLPASVQVEDLIQAGMIGLLEVS
TKYDSTKGASFETYAGIRIRGAMLDEVRKGDWAPRSVHRNTRMVSDAIRAIEAKTGRDAK
DHEVAAELQLSLDDYYGILNDTLGSRLFSFDDLLQDGDHEGLHEDGASGSLEPSRDLEDE
RFQAALADAIANLPERERLVLALYYDEELNLKEIGEVLGVSESRVSQLHSQCAARLRGRL
GEWRAR
NT seq 741 nt   +upstreamnt  +downstreamnt
atgactgcgagcggctatcagatgtacagcaagacttctcgtaactcacaatatgagctg
atcgagcggtatgcaccgctggtcaaacgtattgcctaccacttgctggcgcgtttgccg
gccagtgtgcaggtcgaggatctgattcaggccggcatgatcggtctgcttgaagtctct
accaaatatgactccaccaaaggtgcgagtttcgagacctatgccggtattcgcatccgt
ggagccatgctcgacgaagtgcgcaagggtgactgggcgcctcgctcggtgcaccgaaat
acccgcatggtcagtgacgcaattcgcgcaattgaagctaaaaccggacgtgacgctaaa
gatcacgaggttgcggccgaactccagttgagtcttgatgattattacgggattttgaat
gataccttgggcagccgcctcttcagtttcgacgacctgttacaggacggcgatcatgaa
gggctgcacgaggacggcgcgagcggttcgctcgagccgtcgcgcgacctggaagacgag
cgcttccaggccgcgttggccgatgcaattgccaatttgccggagcgtgagcgtctggtg
ttggcgctgtactatgacgaagagctgaacctgaaggaaatcggagaggttctaggggtc
agcgaatcgcgagtcagtcagttacacagccagtgcgcagctcgtttgcgagggcgtttg
ggggagtggcgagcgcgttga

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