Pseudomonas syringae CC1557: N018_16015
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Entry
N018_16015 CDS
T03014
Name
(GenBank) isocitrate dehydrogenase
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
psyr
Pseudomonas syringae CC1557
Pathway
psyr00020
Citrate cycle (TCA cycle)
psyr00480
Glutathione metabolism
psyr00720
Other carbon fixation pathways
psyr01100
Metabolic pathways
psyr01110
Biosynthesis of secondary metabolites
psyr01120
Microbial metabolism in diverse environments
psyr01200
Carbon metabolism
psyr01210
2-Oxocarboxylic acid metabolism
psyr01230
Biosynthesis of amino acids
psyr04146
Peroxisome
Module
psyr_M00009
Citrate cycle (TCA cycle, Krebs cycle)
psyr_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
psyr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
N018_16015
09102 Energy metabolism
00720 Other carbon fixation pathways
N018_16015
09106 Metabolism of other amino acids
00480 Glutathione metabolism
N018_16015
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
N018_16015
Enzymes [BR:
psyr01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
N018_16015
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GFIT
Motif
Pfam:
IDH
CAMP_factor
HTH_39
Motif
Other DBs
NCBI-ProteinID:
AHG41622
UniProt:
W0MT61
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Position
3556851..3559073
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AA seq
740 aa
AA seq
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MSNRSKIIYTFTDEAPALATYSLLPVIEAFTATSDIDVETRDISLAGRVLSSFPELLADK
KVPDHLAELGKLATTPEANIIKLPNISASVPQLKATIKELQNQGYNIPDYPENPATDAEK
ETRARYDKTKGSAVNPVLREGNSDRRAPLSVKNYARKHPHKMGAWSADSKAHVAHMSNGD
FYGSEKATQIEADNTVKIELVAQDGTTTVLKEKTAVKAGEVVDCSVMSAKALRSFIAAEI
EDARKQGVLFSVHLKATMMKISDPIMFGQIVDEFYKDALTKHADTLKQIGFSLNNGIGDL
YERIGVLPAEKQAEIKADIEAVYAVRPQLAMVNSDKGITNLHVPSDVIVDASMPAMIRDS
GKMWGTDGQLHDAKAVIPDRCYATIYQAVIEDCKKNGAFDPTTMGSVPNVGLMAQKAEEY
GSHDKTFHIQANGVVRVTDSQGNLLMEQNVEAGDIWRMCQAKDAPIQDWVKLAVNRARAS
NTPAIFWLDASRAHDSVMIEKVQKYLGDHDTTGLDIQILSPVDAMKLTLQRTRAGKDTIS
VTGNVLRDYLTDLFPIMELGTSAKMLSIVPLMNGGGLFETGAGGSAPKHVQQFVEENFLR
WDSLGEFLALAASLEHLGNVYNNPKALVLSKTLDQATGEFLDRNKSPSRKVGGIDNRGSH
FYLTLFWAQALAAQNDDAALKAQFTPLAKTLTDNEEKIVAELNAVQGKPVDIGGYYFPNP
EVTSKAMRPSATFNAAIAAL
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccgctcgaagatcatctacaccttcaccgacgaagctccggccctcgccacc
tactcccttctgcctgtcattgaagcgttcacggcaacctccgatattgacgtggaaaca
cgcgacatctctctggcgggccgtgttctttccagcttcccggagttgcttgccgacaaa
aaagtgccggatcatctcgccgagctgggcaaactggccaccacgccagaagccaacatc
atcaagctgcccaacatcagcgcctcggtcccgcagttgaaggcgaccatcaaggagctt
cagaatcagggctacaacatccctgactaccctgagaaccctgccactgatgcggaaaaa
gaaacccgtgcccgctacgacaagaccaagggcagcgccgtaaacccggtgctgcgtgaa
ggtaactctgaccgccgtgcgccgttgtcggtcaagaactacgcccgcaagcacccgcac
aaaatgggcgcctggtccgccgattcgaaagcgcacgttgcacacatgagcaacggtgac
ttctacggcagcgagaaagccacccagatcgaagccgacaacaccgtcaagatcgaactg
gtcgcccaggatggcaccaccaccgtcctgaaagaaaaaaccgccgtcaaggcaggcgaa
gtcgtcgattgctcggtgatgagcgccaaggcactgcgtagcttcatcgctgctgaaatc
gaagacgcccgcaaacaaggcgtgctgttttcggtgcacttgaaagccaccatgatgaag
atctccgatccgatcatgttcggccagattgtcgacgagttctacaaggacgcgctgacc
aagcacgctgatacgttgaaacagatcggcttcagcctgaacaacggcattggtgacctg
tacgagcgcattggtgttctgccagcggaaaagcaggcggaaatcaaggccgacatcgag
gcggtctacgccgtccgtccgcaactggcgatggtcaactccgacaagggcatcaccaac
ctgcacgtaccgagcgacgtgatcgtcgacgcatcgatgccagccatgatccgtgactcc
ggcaaaatgtggggcacagacggtcagttgcacgatgccaaggccgtcattccggaccgt
tgctacgccactatttatcaagccgtcatcgaagactgcaagaaaaacggtgccttcgat
ccgactaccatgggcagcgtgccaaacgtcggcctgatggctcagaaagccgaagagtac
gggtcccacgacaagaccttccatatccaggccaacggtgtggttcgcgtgaccgacagc
caaggcaacctgctgatggagcagaacgtcgaagctggcgatatctggcgcatgtgccag
gccaaggacgcgccgattcaggactgggtgaaactggccgtcaaccgcgctcgcgcaagc
aacacgccagcgattttctggctggatgcgtctcgcgcccatgacagcgtgatgatcgag
aaagtccagaagtacctgggcgaccacgatacgacggggctggacatccagatcctgtcg
ccggtcgacgccatgaagctgaccctgcagcgcactcgcgccggcaaggacaccatctcg
gtgaccggtaacgtgctgcgcgactacctcaccgacctgttcccgatcatggaactgggt
accagcgcgaaaatgctgtcgatcgttccgctgatgaatggtggcggcctgttcgaaacc
ggcgctggcggttcggctccgaagcatgttcagcagttcgtcgaagagaacttcctgcgc
tgggattcgctgggcgagttcctcgccctggcagcctcgctggagcatctgggtaacgtt
tataacaacccgaaagcgctggttctttccaaaaccctggaccaagccactggcgagttc
ctggatcgcaacaagtcaccttcgcgcaaggttggcggtattgacaaccgtggcagtcac
ttctacctgaccctgttctgggcacaggcactggccgcccagaatgacgatgcagccctc
aaggcgcagttcacacctctggccaaaaccctgaccgacaacgaggaaaaaatcgttgcc
gagctgaacgctgttcagggcaagccagtggacatcggcggctactacttccctaacccg
gaagtaaccagcaaagccatgcgcccaagtgcaacattcaacgcagccatcgcagcgttg
taa
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