Pseudomonas syringae CC1557: N018_16230
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Entry
N018_16230 CDS
T03014
Name
(GenBank) LysR family transcriptional regulator
KO
K17737
LysR family transcriptional regulator, carnitine catabolism transcriptional activator
Organism
psyr
Pseudomonas syringae CC1557
Brite
KEGG Orthology (KO) [BR:
psyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psyr03000
]
N018_16230
Transcription factors [BR:
psyr03000
]
Prokaryotic type
Helix-turn-helix
LysR family
N018_16230
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Ortholog
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GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_23
MarR_2
Motif
Other DBs
NCBI-ProteinID:
AHG41660
UniProt:
W0MWR8
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Position
complement(3603887..3604777)
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AA seq
296 aa
AA seq
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MNVKQLRAFLAVAQYLSFAQAGERLNVSQPALSLTIKALEEDLGGQLLTRTTRNVGLTPE
GETLLPLARQLLADWDNTEELLRQRFTLQMGRVSIAAMPSFAGNLLPAALKVFRGRYPRV
NVAVHDVVNEQVLEMVRHRRVELGIGFEPESSSALLFTPFYMDRFVAVVAQDSPLAERSE
VSWEDLLCEDFIALQRPSAVRLLLEQAIEPRHGKLSVAFESHQLSTVGRMVANGLGVSAV
PSLCIRQMQELGARCIGLVEPRIERRIGLMMLADHKLSAAAQALREVLIENARASR
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtcaagcagcttcgggcttttctggctgtcgcgcagtacctgagttttgctcag
gctggcgagcggctgaatgtgtcgcaaccggcgctgagcctgacgatcaaggcgctggag
gaagacttgggtggccagttgctgacacgcacgacgcgcaacgttggcctgacgcccgaa
ggagaaaccctgctgcccctggcgcgccagctgttggcggactgggacaacaccgaggaa
ctgctgcgccagcgcttcaccctgcaaatgggccgggtctccatcgcagcgatgccgtcg
tttgcaggcaacctgctgcccgcagcgctgaaggtttttcgcggacgttacccacgggtc
aatgtcgcggtgcatgacgtggtcaacgagcaggtgctggagatggtgcgtcatcggcgt
gttgaactggggatcggcttcgaacccgagtccagcagtgctttgctgtttacgccgttt
tacatggatcgcttcgtggctgtggttgcgcaggattcgcccttggccgaacgcagtgaa
gtgtcatgggaggatttgctatgcgaagatttcattgccctgcaacgaccttccgctgtg
cgcctgttgctggagcaggccatcgagcctcggcatggcaagctttcggtggcgtttgaa
agtcatcagctttctacggtgggccgcatggtcgccaacggtctgggcgtcagcgccgtg
ccgtcgctgtgcatcaggcagatgcaggagctgggtgcgcgttgcatcgggctggtcgaa
ccgcgcattgaacgtcgtatcggtttgatgatgctggccgatcacaagctgtcggcagcc
gcgcaggcgttgcgtgaggtgttgatcgaaaatgctcgggcaagtcgatag
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