Pseudomonas syringae CC1557: N018_16535
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Entry
N018_16535 CDS
T03014
Name
(GenBank) lytic transglycosylase
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
psyr
Pseudomonas syringae CC1557
Brite
KEGG Orthology (KO) [BR:
psyr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
psyr01011
]
N018_16535
Enzymes [BR:
psyr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
N018_16535
Peptidoglycan biosynthesis and degradation proteins [BR:
psyr01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
N018_16535
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
SLT_L
Cucumo_coat
Motif
Other DBs
NCBI-ProteinID:
AHG41720
UniProt:
W0MWX3
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Position
3672890..3674818
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AA seq
642 aa
AA seq
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MRSRFFSFLSCLLLSATAVQTAHAADLNQQRKYYDEAKRALAKGDSGPYQMYSTVLADYP
LEPYLEYDELTARLKTASNAEIERFLAEHGDLPQANWMKLRWLRWLAERGDWQPFVKYYD
PKMKFVELDCLYGQYQLNNNKRAEGYASAEKLWMTGKTLPAACDGFFAQWAAAGQLTEQK
RWQRAKLAAQASNYSLANTLVNSLNSLAPQGRLLLAVAQKPELVNNPSQFAPVDEAMSDV
VGLGLRRLAKQDPQKALSMLDGYAATMHFSREEQVEIAKEIGLTLARRYDDRALEVMTKY
DPELRDDTVTEWRMRLLLRLGRWEDAYELARRLPKDLAATNRWRYWEARSLELAQPNSPL
IAALYKDVAKERDFYGFLAADRTQSPYQLNNKPLVLSQALINKVRNTPGVRRALEFHDRG
EIVNGRREWYHVSRLFNRDEMVAQAKLAYDMQWYFPAIRTISQAQYWDDLDIRFPMAHRD
TLVREARVRGLHSSWVFAITRQESAFMDDARSGVGAAGLMQLMPATAKETARKYSIPLAS
PQQILDPDTNIQLGAAYLSSVHAQFNGNRVLASAAYNAGPGRVRQWLKGANHLAFDVWVE
SIPFDETRQYVQNVLSYSVIYGQKLNSPQPLVDWHERFFDDL
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagtcgttttttcagctttttatcgtgcctgctcctctccgccaccgccgtccag
actgctcatgcggcagacctcaaccaacaacgcaaatattacgacgaagcaaagcgcgcg
ctggccaagggtgattcaggcccttatcagatgtacagcactgtgctggccgactatcct
ttggagccgtatctcgaatacgacgagctgaccgcgcgcctgaaaacagcgagcaatgcc
gaaatcgagaggtttctggcagaacatggcgacctgccgcaggccaactggatgaagctg
cgctggttgcgctggctggcagagcgtggtgactggcaacccttcgtcaagtattacgac
ccgaagatgaagttcgtcgaactggactgcctgtacggacagtaccagttgaataacaac
aagcgcgccgaaggctatgccagtgctgaaaagctctggatgaccggcaagacattgcca
gccgcctgtgacgggttcttcgcccagtgggcggcagctggccaattaactgaacagaaa
cgctggcagcgcgccaagctggcggcccaggcgagcaactacagcctggccaacacgctg
gtcaacagcctcaactcgctggctccgcagggacgcttgctactggctgtcgcgcaaaag
ccggaactggtcaacaacccttcgcagttcgccccggtagatgaagccatgtccgacgtg
gtcggtctcggcctgcgccgtctggccaaacaggacccgcagaaagccctgtcgatgctg
gatggctatgccgcaaccatgcatttctctcgcgaagagcaggtcgagattgccaaggaa
atcggcctgaccctggcccgtcgctacgacgaccgtgcacttgaagtcatgaccaaatac
gatccagagctgcgcgacgacacggtcaccgagtggcgtatgcgcctgctgctgcgcctg
ggtcgctgggaggacgcctacgagctggcgcgccgactgcccaaggatctggcagcgacc
aatcgctggcgctattgggaagcccgctcgctggagctggcgcaaccgaacagcccgctg
attgccgcgctgtacaaggatgtcgccaaggaacgtgacttctacggtttcctggccgct
gaccgcacccagagcccataccagctcaataacaagccactggtgctcagccaggcactg
atcaacaaagtgcgcaacacgccaggcgtgcgtcgcgcgctggagtttcatgatcgcggc
gaaatcgtcaacggccgacgcgagtggtatcacgtcagccgcctgttcaatcgtgacgaa
atggtcgcccaggccaaactggcctatgacatgcagtggtacttcccggcgatccgcacc
ataagccaggcgcaatactgggacgatctggatatccgcttcccgatggcgcatcgcgac
acactggtacgcgaagccagggtgcggggcctgcattcaagctgggtgtttgcaattacc
cgacaggaaagcgcgttcatggacgatgcccgctcgggtgtcggcgctgctggcctgatg
caattgatgccggccaccgccaaggaaacagcgcgcaaatacagcatcccgctcgcctcg
cctcagcagatactggacccggacaccaatatccagctgggcgctgcctacctgagctcg
gtacacgcgcagttcaacggcaaccgcgtgctcgcctcggctgcgtacaacgcaggcccc
ggccgtgtgcggcagtggctgaagggcgccaaccacctggccttcgatgtctgggtagaa
agcatcccattcgacgaaacccggcagtacgtgcagaacgtgttgtcttactcggtgatc
tacggccagaagctcaactcaccccagcccctggtggactggcacgaacgcttcttcgac
gacctctga
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